RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TMEM63AO94886 807 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 ASNSP08243 561 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 PRKACAP17612 351 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 PTGS2P35354 604 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 GTF2IP78347 998 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 TCEAL1Q15170 157 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 STK11Q15831 433 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 PCGF5Q86SE9 256 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 ANKRD60Q9BZ19 345 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 MIR1-1HGQ9H1L0 117 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 PSME2Q9UL46 239 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 MEN1O00255 615 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 ITIH1P19827 911 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 GDF10P55107 478 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 VAC14Q08AM6 782 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 STILQ15468 1287 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 TATDN1Q6P1N9 297 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 MAVSQ7Z434 540 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 ZFP90Q8TF47 636 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 NRBF2Q96F24 287 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 MRPL9Q9BYD2 267 aaKnown RBP15.34■□□□□ 0.05
VLDLR-202ENST00000382099 B3GNT4Q9C0J1 378 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 WDR12Q9GZL7 423 aaKnown RBP15.34■□□□□ 0.05
VLDLR-202ENST00000382099 SPC25Q9HBM1 224 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 PCDH9Q9HC56 1237 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 ADPRHL2Q9NX46 363 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 FETUBQ9UGM5 382 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 AURKCQ9UQB9 309 aa15.34■□□□□ 0.05
VLDLR-202ENST00000382099 CXorf49A8MYA2 514 aaPredicted RBP15.33■□□□□ 0.04
VLDLR-202ENST00000382099 SOCS2O14508 198 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 GH2P01242 217 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 PIK3R1P27986 724 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 ETV3P41162 512 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 NSFP46459 744 aaKnown RBP15.33■□□□□ 0.04
VLDLR-202ENST00000382099 PPP3CAQ08209 521 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 TEDDM1Q5T9Z0 273 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 PCDH20Q8N6Y1 951 aaKnown RBP15.33■□□□□ 0.04
VLDLR-202ENST00000382099 SMOXQ9NWM0 555 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 MINPP1Q9UNW1 487 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 FAM149AA5PLN7 773 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 FAM172BPA6NC97 362 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 RAD51BO15315 384 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 PROSCO94903 275 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 MYCP01106 439 aaPredicted RBP15.33■□□□□ 0.04
VLDLR-202ENST00000382099 IL4RP24394 825 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 HADHAP40939 763 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 ARPP19P56211 112 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 LSM3P62310 102 aaKnown RBP15.33■□□□□ 0.04
VLDLR-202ENST00000382099 CHRNEQ04844 493 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 PPP1R3AQ16821 1122 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 FAM214AQ32MH5 1076 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 TBC1D10BQ4KMP7 808 aaPredicted RBP15.33■□□□□ 0.04
VLDLR-202ENST00000382099 SLCO6A1Q86UG4 719 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 CCDC28AQ8IWP9 274 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 FAM178BQ8IXR5 827 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 HACE1Q8IYU2 909 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 CBR4Q8N4T8 237 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 GIPC2Q8TF65 315 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 HDAC2Q92769 488 aaKnown RBP15.33■□□□□ 0.04
VLDLR-202ENST00000382099 VPS33AQ96AX1 596 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 SLC10A4Q96EP9 437 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 MAP6Q96JE9 813 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 DGCR6LQ9BY27 220 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 AGPAT3Q9NRZ7 376 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 C10orf71Q711Q0 1435 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 LAMB2P55268 1798 aa15.33■□□□□ 0.04
VLDLR-202ENST00000382099 ARHGEF35A5YM69 484 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 H3BUI4 141 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 EDIL3O43854 480 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 FAM189A1O60320 539 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 TGM1P22735 817 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 CYP20A1Q6UW02 462 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 POC5Q8NA72 575 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 LINC00116Q8NCU8 138 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 DMRTB1Q96MA1 342 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 WDR55Q9H6Y2 383 aaPredicted RBP15.32■□□□□ 0.04
VLDLR-202ENST00000382099 RUBCNLQ9H714 662 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 ITM2CQ9NQX7 267 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 PARVAQ9NVD7 372 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 SFMBT1Q9UHJ3 866 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 RGS13O14921 159 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 CCDC159P0C7I6 412 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 TCF4P15884 667 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 RFX1P22670 979 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 CES1P23141 567 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 CACNB3P54284 484 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 PICALMQ13492 652 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 PIGGQ5H8A4 983 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 ARMC8Q8IUR7 673 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 CADM2Q8N3J6 435 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 TOR1AIP2Q8NFQ8 470 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 DACH2Q96NX9 599 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 EFHD1Q9BUP0 239 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 ADI1Q9BV57 179 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 SOX17Q9H6I2 414 aaPredicted RBP15.32■□□□□ 0.04
VLDLR-202ENST00000382099 ATP13A3Q9H7F0 1226 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 HSPA4LO95757 839 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 MFAP3P55082 362 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 GALNT2Q10471 571 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms