RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 MGAT1P26572 445 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 ETV4P43268 484 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 GPR15P49685 360 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 DDR2Q16832 855 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 HHATQ5VTY9 493 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 CCDC121Q6ZUS5 278 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 SPATA21Q7Z572 469 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 CTAGE3PQ8IX95 158 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 C2orf15Q8WU43 125 aaKnown RBP19.71■□□□□ 0.75
GMDS-201ENST00000380805 SPATA17Q96L03 361 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 FCRL2Q96LA5 508 aaPredicted RBP19.71■□□□□ 0.75
GMDS-201ENST00000380805 TRIM56Q9BRZ2 755 aaKnown RBP19.71■□□□□ 0.75
GMDS-201ENST00000380805 LRFN2Q9ULH4 789 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 STARD13Q9Y3M8 1113 aa19.71■□□□□ 0.75
GMDS-201ENST00000380805 CCT8L1PA6NM43 557 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 KRT38O76015 456 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 RTN3O95197 1032 aaPredicted RBP19.7■□□□□ 0.74
GMDS-201ENST00000380805 GALTP07902 379 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 PSEN1P49768 467 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 GATMP50440 423 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 CRYMQ14894 314 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 TIFABQ6ZNK6 161 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 ANKRD33Q7Z3H0 272 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 CHSY1Q86X52 802 aa19.7■□□□□ 0.74
GMDS-201ENST00000380805 MLPHQ9BV36 600 aaPredicted RBP19.7■□□□□ 0.74
GMDS-201ENST00000380805 ACTR5Q9H9F9 607 aaPredicted RBP19.7■□□□□ 0.74
GMDS-201ENST00000380805 MTMR11A4FU01 709 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 TRIM49D1C9J1S8 452 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 VNN2O95498 520 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 ATN1P54259 1190 aaPredicted RBP19.69■□□□□ 0.74
GMDS-201ENST00000380805 MLLT6P55198 1093 aaPredicted RBP19.69■□□□□ 0.74
GMDS-201ENST00000380805 USP46P62068 366 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 DNAJC3Q13217 504 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 LRRC49Q8IUZ0 686 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 ZNF683Q8IZ20 524 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 RTL3Q8N8U3 475 aaKnown RBP19.69■□□□□ 0.74
GMDS-201ENST00000380805 DEPDC1BQ8WUY9 529 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 SYBUQ9NX95 663 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 HS3ST4Q9Y661 456 aa19.69■□□□□ 0.74
GMDS-201ENST00000380805 HMX2A2RU54 273 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 H7C4K7 107 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 AP3B1O00203 1094 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 LPXNO60711 386 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 EDF1O60869 148 aaKnown RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 RFPL1O75677 317 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 ADRA1DP25100 572 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 DNAJB2P25686 324 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 SESN2P58004 480 aaPredicted RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 SPANXN3Q5MJ09 141 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 SDHAF4Q5VUM1 108 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 RWDD4Q6NW29 188 aaKnown RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 ANKS3Q6ZW76 656 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 ATAD1Q8NBU5 361 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 LRRC8CQ8TDW0 803 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 FATE1Q969F0 183 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 CEP295NLQ96MC4 621 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 IL12RB2Q99665 862 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 PAIP2Q9BPZ3 127 aaKnown RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 SIK2Q9H0K1 926 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 OLA1Q9NTK5 396 aaKnown RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 GMIPQ9P107 970 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 ARL2BPQ9Y2Y0 163 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 E9PAM4 449 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 F5H423 210 aaPredicted RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 PSMD3O43242 534 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 MAFKO60675 156 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 SRGAP2BP0DMP2 458 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 PYGBP11216 843 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 NFKB1P19838 968 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 YWHAQP27348 245 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 ZKSCAN8Q15776 578 aaPredicted RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 RTP2Q5QGT7 225 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 ACBD5Q5T8D3 534 aaPredicted RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 UBE2Q1Q7Z7E8 422 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 TMEM135Q86UB9 458 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 CEP57Q86XR8 500 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 LRRC43Q8N309 656 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 TTC9BQ8N6N2 239 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 CNTD1Q8N815 330 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 CDKL2Q92772 493 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 CELF6Q96J87 481 aaKnown RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 PGLYRP2Q96PD5 576 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 KLF6Q99612 283 aaPredicted RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 PITPNM3Q9BZ71 974 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 LRRC40Q9H9A6 602 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.68■□□□□ 0.74
GMDS-201ENST00000380805 SLC17A7Q9P2U7 560 aa19.68■□□□□ 0.74
GMDS-201ENST00000380805 PPARGC1AQ9UBK2 798 aaKnown RBP19.68■□□□□ 0.74
GMDS-201ENST00000380805 COL4A6Q14031 1691 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 ARHGAP42A6NI28 874 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 GOLGA8RI6L899 631 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 UGT1A9O60656 530 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 IGLV3-27P01718 113 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 POLBP06746 335 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 ZDHHC11BP0C7U3 371 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 HAPLN1P10915 354 aaPredicted RBP19.67■□□□□ 0.74
GMDS-201ENST00000380805 RNF187Q5TA31 235 aaPredicted RBP19.67■□□□□ 0.74
GMDS-201ENST00000380805 PIK3R6Q5UE93 754 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 RNF43Q68DV7 783 aa19.67■□□□□ 0.74
GMDS-201ENST00000380805 RSPO2Q6UXX9 243 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms