RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TRIM5Q9C035 493 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ALG2Q9H553 416 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 TMPRSS4Q9NRS4 437 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 SEMA4GQ9NTN9 838 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ABCB8Q9NUT2 735 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ARHGEF38Q9NXL2 777 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 VANGL2Q9ULK5 521 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 STARD13Q9Y3M8 1113 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 SNX10Q9Y5X0 201 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 HS3ST4Q9Y661 456 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 BZW2Q9Y6E2 419 aaKnown RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 DSPP15924 2871 aaKnown RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 IGF2RP11717 2491 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 TCRBV5S1A1TA0A578 114 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 SIGLEC16A6NMB1 481 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 LUC7L3O95232 432 aaKnown RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 APBB3O95704 486 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 PLEKP08567 350 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 PABPC1P11940 636 aaKnown RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 GZMAP12544 262 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 HOXB2P14652 356 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 DESP17661 470 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 HLA-FP30511 346 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 NTSR1P30989 418 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 CD70P32970 193 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 PTPN9P43378 593 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 DGKEP52429 567 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 LIMK1P53667 647 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 AUHQ13825 339 aaKnown RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 CRY1Q16526 586 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 RAB6CQ53S08 254 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 SH3PXD2AQ5TCZ1 1133 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ANO7Q6IWH7 933 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 FBXL22Q6P050 247 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 SARM1Q6SZW1 724 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 LRRC31Q6UY01 552 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 PRR23CQ6ZRP0 262 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 CHST9Q7L1S5 443 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 TMC6Q7Z403 805 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 C14orf80Q86SX3 495 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 LONP2Q86WA8 852 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 CIR1Q86X95 450 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 AHI1Q8N157 1196 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 WFDC5Q8TCV5 224 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 WFIKKN2Q8TEU8 576 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 FAM172AQ8WUF8 416 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 SORCS1Q8WY21 1168 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ZNF653Q96CK0 615 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ERLEC1Q96DZ1 483 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 TRIM11Q96F44 468 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 VCPIP1Q96JH7 1222 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 RAB6CQ9H0N0 254 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 POLMQ9NP87 494 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ANLNQ9NQW6 1124 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 PARVAQ9NVD7 372 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 TMEM51Q9NW97 253 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ZNHIT6Q9NWK9 470 aaKnown RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ELOVL2Q9NXB9 296 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 CACNA2D2Q9NY47 1150 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 MYO1AQ9UBC5 1043 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 CNOT8Q9UFF9 292 aaKnown RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ADAMTS1Q9UHI8 967 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 GGA2Q9UJY4 613 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 ANGPTL2Q9UKU9 493 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
HMGN1-202ENST00000380747 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
HMGN1-202ENST00000380747 KIAA1549LQ6ZVL6 1849 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 TCRBV21S2A2A0A5A6 115 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 AXIN1O15169 862 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 CCP110O43303 1012 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 TIMM44O43615 452 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 ADAM23O75077 832 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 ALDH1A2O94788 518 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 ENDOD1O94919 500 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 HNRNPLP14866 589 aaKnown RBP eCLIP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 PMLP29590 882 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 HOXA6P31267 233 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 EIF4A3P38919 411 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF143P52747 638 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 RPL7AP62424 266 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 LMAN2Q12907 356 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 SRSF5Q13243 272 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 EIF4HQ15056 248 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 ARL13BQ3SXY8 428 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 FNDC3BQ53EP0 1204 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 FSCBQ5H9T9 825 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 TTC39BQ5VTQ0 682 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 MBLAC2Q68D91 279 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 PLEKHA7Q6IQ23 1121 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 SCYL2Q6P3W7 929 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 STRADAQ7RTN6 431 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 BNIPLQ7Z465 357 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 WDR5BQ86VZ2 330 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 GAS2L3Q86XJ1 694 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 CCAR2Q8N163 923 aaKnown RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 PGBD3Q8N328 593 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms