RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CNGB3Q9NQW8 809 aa7.96□□□□□ -1.14
CDKL5-202ENST00000379996 ARHGEF4Q9NR80 690 aa7.96□□□□□ -1.14
CDKL5-202ENST00000379996 TLR9Q9NR96 1032 aa7.96□□□□□ -1.14
CDKL5-202ENST00000379996 PSMC3IPQ9P2W1 217 aaPredicted RBP7.96□□□□□ -1.14
CDKL5-202ENST00000379996 C15orf41Q9Y2V0 281 aa7.96□□□□□ -1.14
CDKL5-202ENST00000379996 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.96□□□□□ -1.14
CDKL5-202ENST00000379996 MYLKQ15746 1914 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 DENND4CQ5VZ89 1909 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 EXOC1LA0A1B0GW35 172 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 C2orf71A6NGG8 1288 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 HCRTO43612 131 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 ATP2C2O75185 946 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 PDGFRBP09619 1106 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 CTNNB1P35222 781 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 MSH2P43246 934 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 ROR1Q01973 937 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 TAF5Q15542 800 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 RAB6CQ53S08 254 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 SPOUT1Q5T280 376 aaKnown RBP7.95□□□□□ -1.14
CDKL5-202ENST00000379996 OLFML1Q6UWY5 402 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 SPATA2LQ8IUW3 424 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-202ENST00000379996 UNC45BQ8IWX7 931 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 PPIL6Q8IXY8 311 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 PTPRN2Q92932 1015 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 SKA1Q96BD8 255 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 FAF2Q96CS3 445 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 MYRFLQ96LU7 910 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 EMILIN2Q9BXX0 1053 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 RAB6CQ9H0N0 254 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 ETNK1Q9HBU6 452 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 FBXW11Q9UKB1 542 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 TIMM13Q9Y5L4 95 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-202ENST00000379996 WDR27A2RRH5 827 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 NT5C1B-RDH14C9J2C7 533 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 DNAJC6O75061 913 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 PEX11AO75192 247 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 CD19P15391 556 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 PFKLP17858 780 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 TUFMP49411 452 aaKnown RBP7.95□□□□□ -1.14
CDKL5-202ENST00000379996 GEMIN4P57678 1058 aaKnown RBP7.95□□□□□ -1.14
CDKL5-202ENST00000379996 OTUD4Q01804 1114 aaKnown RBP7.95□□□□□ -1.14
CDKL5-202ENST00000379996 CAMK1Q14012 370 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 DNAJC24Q6P3W2 148 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 TMEM184AQ6ZMB5 413 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 SLC26A9Q7LBE3 791 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 BHLHA9Q7RTU4 235 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 CHSY1Q86X52 802 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 ACTL9Q8TC94 416 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 SLC22A17Q8WUG5 538 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 KLHL5Q96PQ7 755 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 TMEM209Q96SK2 561 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 MIPEPQ99797 713 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
CDKL5-202ENST00000379996 SAE1Q9UBE0 346 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-202ENST00000379996 APOC4-APOC2K7ER74 178 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 C2CD2LO14523 706 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 SPAG7O75391 227 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ARHGEF15O94989 841 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 TRUB2O95900 331 aaKnown RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 APOC2P02655 101 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 CA3P07451 260 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ACAT1P24752 427 aaKnown RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ELF1P32519 619 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 STX2P32856 288 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 CCNFP41002 786 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 PPP3CCP48454 512 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 PSMC1P62191 440 aaKnown RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 RPL10AP62906 217 aaKnown RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 IL9RQ01113 521 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 USP4Q13107 963 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 DNAJC3Q13217 504 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 KCNC3Q14003 757 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 SLC39A12Q504Y0 691 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 FAM109BQ6ICB4 259 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 PMF1Q6P1K2 205 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ZNF534Q76KX8 674 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ERICH1Q86X53 443 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 VSIG1Q86XK7 387 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ZNF687Q8N1G0 1237 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 KIF2BQ8N4N8 673 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 CFAP61Q8NHU2 1237 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 NT5C3BQ969T7 300 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 SLC2A13Q96QE2 648 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 MYCBPQ99417 103 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 CXorf56Q9H5V9 222 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 C10orf88Q9H8K7 445 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 MKS1Q9NXB0 559 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 SCML2Q9UQR0 700 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 TTLL3Q9Y4R7 772 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ASB3Q9Y575 518 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 HELZP42694 1942 aaKnown RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 NDC80O14777 642 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 RTN3O95197 1032 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ZWINTO95229 277 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 ZDHHC11BP0C7U3 371 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 DNAJB1P25685 340 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 PCK1P35558 622 aa7.94□□□□□ -1.14
CDKL5-202ENST00000379996 PBX3P40426 434 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms