RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 A0A0U1RQJ8 604 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 EEF2KO00418 725 aaKnown RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 FGF10O15520 208 aaPredicted RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 NRDCO43847 1150 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 PAPSS2O95340 614 aaPredicted RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 MOCS3O95396 460 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 ATP5BP06576 529 aaKnown RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 RHOCP08134 193 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 KRT7P08729 469 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 POLR2EP19388 210 aaKnown RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 COMTP21964 271 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 TPI1P60174 286 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 ENPP2Q13822 863 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 ATP13A4Q4VNC1 1196 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 LRRC38Q5VT99 294 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 RNF219Q5W0B1 726 aaPredicted RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 C11orf63Q6NUN7 778 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 RFX8Q6ZV50 586 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 SYT13Q7L8C5 426 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 TRMT11Q7Z4G4 463 aaKnown RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 ALLCQ8N6M5 410 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 RTL3Q8N8U3 475 aaKnown RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 ATRIPQ8WXE1 791 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 HSPH1Q92598 858 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 CIPCQ9C0C6 399 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 CATSPERBQ9H7T0 1116 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.25■□□□□ 0.67
SSU72-203ENST00000378725 NDFIP2Q9NV92 336 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 SPATA6Q9NWH7 488 aaPredicted RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 C2orf42Q9NWW7 574 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 CWC15Q9P013 229 aaKnown RBP19.25■□□□□ 0.67
SSU72-203ENST00000378725 MMP17Q9ULZ9 603 aa19.25■□□□□ 0.67
SSU72-203ENST00000378725 CUL9Q8IWT3 2517 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 MIA3Q5JRA6 1907 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 GALR2O43603 387 aaPredicted RBP19.24■□□□□ 0.67
SSU72-203ENST00000378725 BUB1O43683 1085 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 ADAM23O75077 832 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 KLF8O95600 359 aaPredicted RBP19.24■□□□□ 0.67
SSU72-203ENST00000378725 ASLP04424 464 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 DLDP09622 509 aaKnown RBP19.24■□□□□ 0.67
SSU72-203ENST00000378725 GOT1P17174 413 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 CXCL12P48061 93 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 CCR3P51677 355 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 PTPRNQ16849 979 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 PPP6R3Q5H9R7 873 aaPredicted RBP19.24■□□□□ 0.67
SSU72-203ENST00000378725 ZNF662Q6ZS27 426 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 MAML2Q8IZL2 1156 aaPredicted RBP19.24■□□□□ 0.67
SSU72-203ENST00000378725 TXNDC5Q8NBS9 432 aaKnown RBP19.24■□□□□ 0.67
SSU72-203ENST00000378725 SORCS1Q8WY21 1168 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 TSC1Q92574 1164 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 ACDQ96AP0 544 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 ACOX2Q99424 681 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 PCDH18Q9HCL0 1135 aa19.24■□□□□ 0.67
SSU72-203ENST00000378725 A0A0D9SEW6 157 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 H3BRJ5 948 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 SGK1O00141 431 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 IL4RP24394 825 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 NTSR1P30989 418 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 VASPP50552 380 aaPredicted RBP19.23■□□□□ 0.67
SSU72-203ENST00000378725 SATB1Q01826 763 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 GNA12Q03113 381 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 SULT2A1Q06520 285 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 DPYSQ14117 519 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 ZNF234Q14588 700 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 PDK2Q15119 407 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 EOGTQ5NDL2 527 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 UMODL1-AS1Q8N2C9 162 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 CCDC33Q8N5R6 958 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 KDM1BQ8NB78 822 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 MRGPRX3Q96LB0 322 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 PSMB7Q99436 277 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 GABRG3Q99928 467 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 MUC3BQ9H195 1237 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 ZDHHC4Q9NPG8 344 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 PRMT8Q9NR22 394 aaPredicted RBP19.23■□□□□ 0.67
SSU72-203ENST00000378725 DONSONQ9NYP3 566 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 RCOR3Q9P2K3 495 aaPredicted RBP19.23■□□□□ 0.67
SSU72-203ENST00000378725 TRIM10Q9UDY6 481 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 PLA2G4CQ9UP65 541 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 HYOU1Q9Y4L1 999 aa19.23■□□□□ 0.67
SSU72-203ENST00000378725 LAMTOR5O43504 91 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 SRPRAP08240 638 aaKnown RBP19.22■□□□□ 0.67
SSU72-203ENST00000378725 ERCC2P18074 760 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 ARL4AP40617 200 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 IL12RB1P42701 662 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 CDH6P55285 790 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 ECT2LQ008S8 904 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 RHOT1Q8IXI2 618 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 CHPFQ8IZ52 775 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 RNF10Q8N5U6 811 aaKnown RBP19.22■□□□□ 0.67
SSU72-203ENST00000378725 LRRC57Q8N9N7 239 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 KCTD6Q8NC69 237 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 CYB5D2Q8WUJ1 264 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 MYO19Q96H55 970 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 CSPG4P5Q96PW8 444 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 PRRX2Q99811 253 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 ACE2Q9BYF1 805 aaPredicted RBP19.22■□□□□ 0.67
SSU72-203ENST00000378725 TSGA10Q9BZW7 698 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 MAGEH1Q9H213 219 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms