RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 VCPIP1Q96JH7 1222 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 PPP1R10Q96QC0 940 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 NCAPGQ9BPX3 1015 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 TSSK1BQ9BXA7 367 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 BRD8Q9H0E9 1235 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 NMUR1Q9HB89 426 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 TLR9Q9NR96 1032 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ZDHHC18Q9NUE0 388 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 WHRNQ9P202 907 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 CHKBQ9Y259 395 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 L3MBTL1Q9Y468 752 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 A0A0G2JMZ2 1700 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 OTOFQ9HC10 1997 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 TYW5A2RUC4 315 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 GIPC1O14908 333 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ADAM12O43184 909 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 GPC4O75487 556 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 TOMM70O94826 608 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 GUCA1CO95843 209 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 CHRM3P20309 590 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ECHS1P30084 290 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 STIP1P31948 543 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 SERPINB6P35237 376 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ARFIP2P53365 341 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 CDH13P55290 713 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 SMAD3P84022 425 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 DSC2Q02487 901 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ASPHQ12797 758 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 PTK6Q13882 451 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 C14orf80Q86SX3 495 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ARL14EPQ8N8R7 260 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 CCHCR1Q8TD31 782 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 SLC35F5Q8WV83 523 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 PSMG2Q969U7 264 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 FTHL17Q9BXU8 183 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 LATS2Q9NRM7 1088 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ZFP69BQ9UJL9 534 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 TET1Q8NFU7 2136 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ATP8B3O60423 1300 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 NUP214P35658 2090 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ARHGAP10A1A4S6 786 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 CCL16O15467 120 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 B4GALT3O60512 393 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 FAM107AO95990 144 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 URODP06132 367 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 PBLDP30039 288 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ABL2P42684 1182 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 COPS2P61201 443 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 CDC42EP1Q00587 391 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 OCRLQ01968 901 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 SLC25A11Q02978 314 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 USP4Q13107 963 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ARHGEF6Q15052 776 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 KYAT1Q16773 422 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 KLHL38Q2WGJ6 581 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 N4BP2L1Q5TBK1 243 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 DET1Q7L5Y6 550 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ECHDC2Q86YB7 292 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 CD302Q8IX05 232 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 HS6ST3Q8IZP7 471 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 STMN2Q93045 179 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 TNKS2Q9H2K2 1166 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ATP13A1Q9HD20 1204 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 HEY2Q9UBP5 337 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 STYXL1Q9Y6J8 313 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 EYSQ5T1H1 3165 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 NEMP2A6NFY4 417 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 J3KR12 359 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 STK25O00506 426 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 GPR39O43194 453 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 RAMP2O60895 175 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 ALDH1A1P00352 501 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 PIGRP01833 764 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 POLBP06746 335 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 MYL2P10916 166 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 GFAPP14136 432 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 HDCP19113 662 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 CCR10P46092 362 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 MMEL1Q495T6 779 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 UBXN11Q5T124 520 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 RHBDF2Q6PJF5 856 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TADA2BQ86TJ2 420 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 DDIASQ8IXT1 998 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 ZNF567Q8N184 647 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 LRRC52Q8N7C0 313 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 OR52K2Q8NGK3 314 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 CCT6BQ92526 530 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 RNF31Q96EP0 1072 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SRPK1Q96SB4 655 aaKnown RBP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SEMA3CQ99985 751 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TRIM55Q9BYV6 548 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 KCTD3Q9Y597 815 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 PSAT1Q9Y617 370 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TRIP11Q15643 1979 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 EME2A4GXA9 379 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 IQCF5A8MTL0 148 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 A8MUI8 341 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 ABLIM1O14639 778 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TPP1O14773 563 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms