RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 NEUROG2Q9H2A3 272 aa19.8■□□□□ 0.76
CBWD3-204ENST00000377349 SYNCQ9H7C4 482 aa19.8■□□□□ 0.76
CBWD3-204ENST00000377349 TJP2Q9UDY2 1190 aa19.8■□□□□ 0.76
CBWD3-204ENST00000377349 ADAMTS1Q9UHI8 967 aa19.8■□□□□ 0.76
CBWD3-204ENST00000377349 SLCO3A1Q9UIG8 710 aa19.8■□□□□ 0.76
CBWD3-204ENST00000377349 AJAP1Q9UKB5 411 aaPredicted RBP19.8■□□□□ 0.76
CBWD3-204ENST00000377349 RAXQ9Y2V3 346 aa19.8■□□□□ 0.76
CBWD3-204ENST00000377349 A0A1B0GTQ1 180 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 WNT9AO14904 365 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 LUC7L3O95232 432 aaKnown RBP19.79■□□□□ 0.76
CBWD3-204ENST00000377349 IGLV3-25P01717 112 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 APOEP02649 317 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 ST8SIA6P61647 398 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 EIF4EBP2Q13542 120 aaPredicted RBP19.79■□□□□ 0.76
CBWD3-204ENST00000377349 SHBQ15464 509 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 SMAD1Q15797 465 aaKnown RBP19.79■□□□□ 0.76
CBWD3-204ENST00000377349 COL28A1Q2UY09 1125 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 BEND5Q7L4P6 421 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 CCDC117Q8IWD4 279 aaPredicted RBP19.79■□□□□ 0.76
CBWD3-204ENST00000377349 APCDD1Q8J025 514 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 DDX50Q9BQ39 737 aaKnown RBP19.79■□□□□ 0.76
CBWD3-204ENST00000377349 TUBGCP2Q9BSJ2 902 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 PDCL3Q9H2J4 239 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 FAM204AQ9H8W3 233 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 DNAJC12Q9UKB3 198 aa19.79■□□□□ 0.76
CBWD3-204ENST00000377349 GCN1Q92616 2671 aaKnown RBP19.78■□□□□ 0.76
CBWD3-204ENST00000377349 FAM47DPA6NHR8 397 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 GRAP2O75791 330 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 SRPRAP08240 638 aaKnown RBP19.78■□□□□ 0.76
CBWD3-204ENST00000377349 NUMBP49757 651 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 PITX1P78337 314 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-204ENST00000377349 CDH18Q13634 790 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 VWA3BQ502W6 1294 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 MMAAQ8IVH4 418 aaKnown RBP19.78■□□□□ 0.76
CBWD3-204ENST00000377349 AADATQ8N5Z0 425 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 C1orf131Q8NDD1 294 aaKnown RBP19.78■□□□□ 0.76
CBWD3-204ENST00000377349 PTPRN2Q92932 1015 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 TRIM62Q9BVG3 475 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 SLC4A5Q9BY07 1137 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 NDST4Q9H3R1 872 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 POPDC2Q9HBU9 364 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 PLCB1Q9NQ66 1216 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 NCKAP1Q9Y2A7 1128 aa19.78■□□□□ 0.76
CBWD3-204ENST00000377349 A0A1W2PR77 199 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 TARSL2A2RTX5 802 aaKnown RBP19.77■□□□□ 0.76
CBWD3-204ENST00000377349 GTPBP10A4D1E9 387 aaKnown RBP19.77■□□□□ 0.76
CBWD3-204ENST00000377349 FAM149AA5PLN7 773 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 KRT9P35527 623 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 PTK2Q05397 1052 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 TAF5Q15542 800 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 ZC3H12AQ5D1E8 599 aaKnown RBP19.77■□□□□ 0.76
CBWD3-204ENST00000377349 PRAMEF14Q5SWL7 426 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 ADAT2Q7Z6V5 191 aaKnown RBP19.77■□□□□ 0.76
CBWD3-204ENST00000377349 PDZD3Q86UT5 571 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 CHSY1Q86X52 802 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 LGI2Q8N0V4 545 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 GANCQ8TET4 914 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 STK32AQ8WU08 396 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 SHC3Q92529 594 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 RNF34Q969K3 372 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 PPP1R13BQ96KQ4 1090 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 NOX5Q96PH1 765 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 ACE2Q9BYF1 805 aaPredicted RBP19.77■□□□□ 0.76
CBWD3-204ENST00000377349 FZD4Q9ULV1 537 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 CEP83Q9Y592 693 aa19.77■□□□□ 0.76
CBWD3-204ENST00000377349 EDDM13A0A1B0GTR0 161 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 TRABD2BA6NFA1 517 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 RNASEH2AO75792 299 aaKnown RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 TACR2P21452 398 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 SLC8A1P32418 973 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 STK19P49842 368 aaPredicted RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 YWHAZP63104 245 aaKnown RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 ECT2LQ008S8 904 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 MEA1Q16626 185 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 RAP1GAP2Q684P5 730 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 OR6B2Q6IFH4 312 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 TMEM110Q86TL2 294 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 SLC47A2Q86VL8 602 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 GATAD2AQ86YP4 633 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 STK40Q8N2I9 435 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 GALNT15Q8N3T1 639 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 OR2T34Q8NGX1 318 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 FAM131CQ96AQ9 280 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 RPL10LQ96L21 214 aaKnown RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 CPXM1Q96SM3 734 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 ELF4Q99607 663 aaPredicted RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 PRMT1Q99873 361 aaKnown RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 SIX2Q9NPC8 291 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 SAMSN1Q9NSI8 373 aaKnown RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 TRPM6Q9BX84 2022 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 DFNA5O60443 496 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 RNASEH1O60930 286 aaKnown RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 TRUB2O95900 331 aaKnown RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 VAV1P15498 845 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 ERCC5P28715 1186 aaPredicted RBP19.76■□□□□ 0.75
CBWD3-204ENST00000377349 DRD3P35462 400 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 PSMD8P48556 350 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 CCR5P51681 352 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 METAP1P53582 386 aa19.76■□□□□ 0.75
CBWD3-204ENST00000377349 ADPRHP54922 357 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms