RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CEP76Q8TAP6 659 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 FAM172AQ8WUF8 416 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 FEM1AQ9BSK4 669 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 C2orf49Q9BVC5 232 aaPredicted RBP22.74■■□□□ 1.23
SRM-201ENST00000376957 ZYG11BQ9C0D3 744 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 IFNKQ9P0W0 207 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 LUC7L2Q9Y383 392 aaKnown RBP22.74■■□□□ 1.23
SRM-201ENST00000376957 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.74■■□□□ 1.23
SRM-201ENST00000376957 DRGXA6NNA5 263 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 TMCO5BA8MYB1 307 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 TPM1P09493 284 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 ADRA1BP35368 520 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 TPMTP51580 245 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 ZNF143P52747 638 aaPredicted RBP22.73■■□□□ 1.23
SRM-201ENST00000376957 AIF1P55008 147 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 ZBED6P86452 979 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 RSPO4Q2I0M5 234 aaPredicted RBP22.73■■□□□ 1.23
SRM-201ENST00000376957 C15orf59Q2T9L4 293 aaPredicted RBP22.73■■□□□ 1.23
SRM-201ENST00000376957 TDRD12Q587J7 1177 aaKnown RBP22.73■■□□□ 1.23
SRM-201ENST00000376957 WDR45BQ5MNZ6 344 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 TRNP1Q6NT89 227 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 WDR59Q6PJI9 974 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 C14orf80Q86SX3 495 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 FRMD1Q8N878 549 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 ZNF366Q8N895 744 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 MCEEQ96PE7 176 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 NUSAP1Q9BXS6 441 aaKnown RBP22.73■■□□□ 1.23
SRM-201ENST00000376957 ADAM33Q9BZ11 813 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 TTYH3Q9C0H2 523 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 SLC6A17Q9H1V8 727 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 PPARGC1AQ9UBK2 798 aaKnown RBP22.73■■□□□ 1.23
SRM-201ENST00000376957 OR12D3Q9UGF7 316 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 CKAP5Q14008 2032 aa22.73■■□□□ 1.23
SRM-201ENST00000376957 GVINP1Q7Z2Y8 2422 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 GNSP15586 552 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 MZF1P28698 734 aaPredicted RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 ETFBP38117 255 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 GGCXP38435 758 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 ATXN1P54253 815 aaKnown RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 CCDC6Q16204 474 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 CXorf57Q6NSI4 855 aaKnown RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 ZNF783Q6ZMS7 281 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 ARMCX6Q7L4S7 300 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 SLFN11Q7Z7L1 901 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 DSG4Q86SJ6 1040 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 CADM4Q8NFZ8 388 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 GANCQ8TET4 914 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 CENPIQ92674 756 aaPredicted RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 TOE1Q96GM8 510 aaKnown RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 RPL10LQ96L21 214 aaKnown RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 RTKNQ9BST9 563 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 CNPY3Q9BT09 278 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.72■■□□□ 1.23
SRM-201ENST00000376957 OSBPL2Q9H1P3 480 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 MRPL47Q9HD33 250 aaKnown RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 SUSD2Q9UGT4 822 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 CAPN11Q9UMQ6 739 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 FARP1Q9Y4F1 1045 aaPredicted RBP22.72■■□□□ 1.23
SRM-201ENST00000376957 GPR179Q6PRD1 2367 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 ABCA7Q8IZY2 2146 aa22.72■■□□□ 1.23
SRM-201ENST00000376957 IGLV3-10A0A075B6K4 115 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 RTN2O75298 545 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 IGLV3-19P01714 112 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 FTLP02792 175 aaPredicted RBP22.71■■□□□ 1.23
SRM-201ENST00000376957 MYBL1P10243 752 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 RRM1P23921 792 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 PTGER3P43115 390 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 VASPP50552 380 aaPredicted RBP22.71■■□□□ 1.23
SRM-201ENST00000376957 ACCSLQ4AC99 568 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 SCYL2Q6P3W7 929 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 ZNF571Q7Z3V5 609 aaPredicted RBP22.71■■□□□ 1.23
SRM-201ENST00000376957 RGL4Q8IZJ4 473 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 CPLX3Q8WVH0 158 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 MRGPRX3Q96LB0 322 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 CCDC114Q96M63 670 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 PCED1AQ9H1Q7 454 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 RSPH9Q9H1X1 276 aaPredicted RBP22.71■■□□□ 1.23
SRM-201ENST00000376957 WSB2Q9NYS7 404 aaPredicted RBP22.71■■□□□ 1.23
SRM-201ENST00000376957 SCINQ9Y6U3 715 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 ITIH6Q6UXX5 1313 aa22.71■■□□□ 1.23
SRM-201ENST00000376957 ZNF292O60281 2723 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 MEI4A8MW99 385 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 SERPING1P05155 500 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 NRG1Q02297 640 aaPredicted RBP22.7■■□□□ 1.22
SRM-201ENST00000376957 TRIM14Q14142 442 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 ELAVL3Q14576 367 aaKnown RBP22.7■■□□□ 1.22
SRM-201ENST00000376957 SF3A2Q15428 464 aaKnown RBP22.7■■□□□ 1.22
SRM-201ENST00000376957 TSR1Q2NL82 804 aaKnown RBP22.7■■□□□ 1.22
SRM-201ENST00000376957 EFHC2Q5JST6 749 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 IL31Q6EBC2 164 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 RWDD4Q6NW29 188 aaKnown RBP22.7■■□□□ 1.22
SRM-201ENST00000376957 CACUL1Q86Y37 369 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 NTAN1Q96AB6 310 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 RMDN1Q96DB5 314 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 ZNF419Q96HQ0 510 aaPredicted RBP22.7■■□□□ 1.22
SRM-201ENST00000376957 HSPA12BQ96MM6 686 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 NCAPGQ9BPX3 1015 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 SYT11Q9BT88 431 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 BTBD1Q9H0C5 482 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms