RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SLC47A2Q86VL8 602 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 PNPLA1Q8N8W4 532 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 ADAMTS14Q8WXS8 1223 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 RPRD1AQ96P16 312 aaPredicted RBP21.7■■□□□ 1.06
VSX1-201ENST00000376707 NEUROG2Q9H2A3 272 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 FZD4Q9ULV1 537 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 LRRC72A6NJI9 287 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 ADH1BP00325 375 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 PNMA6AP0CW24 399 aaPredicted RBP21.69■■□□□ 1.06
VSX1-201ENST00000376707 DPY19L2P1Q6NXN4 242 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 FBXL22Q6P050 247 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 NCEH1Q6PIU2 408 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 OLFML1Q6UWY5 402 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 STK40Q8N2I9 435 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 RHBDD1Q8TEB9 315 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 PPP1R9BQ96SB3 815 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 FAM129BQ96TA1 746 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 TUBGCP2Q9BSJ2 902 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 PDCL3Q9H2J4 239 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 ADAMTS1Q9UHI8 967 aa21.69■■□□□ 1.06
VSX1-201ENST00000376707 NUMA1Q14980 2115 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 ZFHX4Q86UP3 3567 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 FAM221BA6H8Z2 402 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 DAB1O75553 588 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 IL1BP01584 269 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 MZF1P28698 734 aaPredicted RBP21.68■■□□□ 1.06
VSX1-201ENST00000376707 CLCN1P35523 988 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 C21orf59P57076 290 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 BPIFB4P59827 614 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 RACK1P63244 317 aaKnown RBP21.68■■□□□ 1.06
VSX1-201ENST00000376707 SLC6A3Q01959 620 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 AUHQ13825 339 aaKnown RBP21.68■■□□□ 1.06
VSX1-201ENST00000376707 ELAVL3Q14576 367 aaKnown RBP21.68■■□□□ 1.06
VSX1-201ENST00000376707 PTPN20Q4JDL3 420 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 SLC26A9Q7LBE3 791 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 OR2T34Q8NGX1 318 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 PTPRN2Q92932 1015 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 IGSF8Q969P0 613 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 CDC6Q99741 560 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 ORAI3Q9BRQ5 295 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 ACE2Q9BYF1 805 aaPredicted RBP21.68■■□□□ 1.06
VSX1-201ENST00000376707 PLCB1Q9NQ66 1216 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 VANGL2Q9ULK5 521 aa21.68■■□□□ 1.06
VSX1-201ENST00000376707 A0A1W2PPC4 97 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 M0QYT0 321 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 KCNK3O14649 394 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 GOT1P17174 413 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 C5AR1P21730 350 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 NOS2P35228 1153 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 PLK1P53350 603 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 CENPCQ03188 943 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 HSP90AA4PQ58FG1 418 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 CXorf57Q6NSI4 855 aaKnown RBP21.67■■□□□ 1.06
VSX1-201ENST00000376707 DBX2Q6ZNG2 339 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 SND1Q7KZF4 910 aaKnown RBP eCLIP21.67■■□□□ 1.06
VSX1-201ENST00000376707 ZDHHC17Q8IUH5 632 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 FAM71AQ8IYT1 594 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 AADATQ8N5Z0 425 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 SKA1Q96BD8 255 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 SLC6A18Q96N87 628 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 HS3ST4Q9Y661 456 aa21.67■■□□□ 1.06
VSX1-201ENST00000376707 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.66■■□□□ 1.06
VSX1-201ENST00000376707 PES1O00541 588 aaKnown RBP21.66■■□□□ 1.06
VSX1-201ENST00000376707 CTSKP43235 329 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 CCT8P50990 548 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 ZNF177Q13360 481 aaPredicted RBP21.66■■□□□ 1.06
VSX1-201ENST00000376707 RAPGEF1Q13905 1077 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 RBM43Q6ZSC3 357 aaKnown RBP21.66■■□□□ 1.06
VSX1-201ENST00000376707 SLCO6A1Q86UG4 719 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 TMEM35BQ8NCS4 154 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 ZNF397Q8NF99 534 aaPredicted RBP21.66■■□□□ 1.06
VSX1-201ENST00000376707 OR14C36Q8NHC7 312 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 BAHD1Q8TBE0 780 aaPredicted RBP21.66■■□□□ 1.06
VSX1-201ENST00000376707 SPAG5Q96R06 1193 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 RRN3Q9NYV6 651 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 SLC25A13Q9UJS0 675 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 BTBD3Q9Y2F9 522 aa21.66■■□□□ 1.06
VSX1-201ENST00000376707 H0Y8X5 98 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 VILLO15195 856 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 PAGE1O75459 146 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 VAV1P15498 845 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 EEF1GP26641 437 aaKnown RBP21.65■■□□□ 1.06
VSX1-201ENST00000376707 GGCXP38435 758 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 RNASE9P60153 205 aaKnown RBP21.65■■□□□ 1.06
VSX1-201ENST00000376707 KCNMA1Q12791 1236 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 KCNJ12Q14500 433 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 DRAP1Q14919 205 aaPredicted RBP21.65■■□□□ 1.06
VSX1-201ENST00000376707 ACCSLQ4AC99 568 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 KCNT1Q5JUK3 1230 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 DSG4Q86SJ6 1040 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 FRS2Q8WU20 508 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 FEM1AQ9BSK4 669 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 SIK2Q9H0K1 926 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 AASDHPPTQ9NRN7 309 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 SAMSN1Q9NSI8 373 aaKnown RBP21.65■■□□□ 1.06
VSX1-201ENST00000376707 VPS28Q9UK41 221 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 STAP1Q9ULZ2 295 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 IGF2RP11717 2491 aa21.65■■□□□ 1.06
VSX1-201ENST00000376707 ASPMQ8IZT6 3477 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 SRRM3A6NNA2 597 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms