RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 PBLDP30039 288 aaPredicted RBP11.83□□□□□ -0.51
VPS13A-205ENST00000376636 ACAD10Q6JQN1 1059 aa11.83□□□□□ -0.51
VPS13A-205ENST00000376636 FAM171BQ6P995 826 aa11.83□□□□□ -0.51
VPS13A-205ENST00000376636 NET1Q7Z628 596 aaPredicted RBP11.83□□□□□ -0.51
VPS13A-205ENST00000376636 MTG1Q9BT17 334 aaPredicted RBP11.83□□□□□ -0.51
VPS13A-205ENST00000376636 CCDC167Q9P0B6 97 aa11.83□□□□□ -0.51
VPS13A-205ENST00000376636 MFHAS1Q9Y4C4 1052 aa11.83□□□□□ -0.51
VPS13A-205ENST00000376636 ZNF335Q9H4Z2 1342 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CHST10O43529 356 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 TAF6P49848 677 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 BCAT1P54687 386 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 REXO5Q96IC2 774 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 AGPAT5Q9NUQ2 364 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CPT1AP50416 773 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CCNG2Q16589 344 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 SPANXN3Q5MJ09 141 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 REXO1L1PQ8IX06 675 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 GPALPP1Q8IXQ4 340 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 TTLL6Q8N841 843 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 BHLHE22Q8NFJ8 381 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF518BQ9C0D4 1074 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PNPLA3Q9NST1 481 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 INTS7Q9NVH2 962 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 MORF4L1Q9UBU8 362 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 DHRS7Q9Y394 339 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 OR5F1O95221 314 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PRLP01236 227 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 BMP7P18075 431 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 SDC2P34741 201 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CEBPGP53567 150 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 MTM1Q13496 603 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF621Q6ZSS3 439 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 VPS35Q96QK1 796 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PANX3Q96QZ0 392 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 SLC39A8Q9C0K1 460 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 EVA1BQ9NVM1 165 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 TLX1P31314 330 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 OXCT1P55809 520 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 DLG4P78352 724 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF549Q6P9A3 640 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF615Q8N8J6 731 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 RHOBTB2Q9BYZ6 727 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 TNPO3Q9Y5L0 923 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PLOD2O00469 737 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 KRT36O76013 467 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 LSM8O95777 96 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 BGNP21810 368 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ADSLP30566 484 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 OFCC1Q8IZS5 231 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CASKIN2Q8WXE0 1202 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PTCD3Q96EY7 689 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 KIAA1257Q9ULG3 409 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 A0A0G2JPF8 293 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 HNRNPCL3B7ZW38 293 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 HNRNPCL4P0DMR1 293 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CLUP10909 449 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 USP46P62068 366 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 KCNA10Q16322 511 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 TEX47Q8TBZ9 253 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 LPAR1Q92633 364 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ERMAPQ96PL5 475 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ALDH8A1Q9H2A2 487 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 DMTF1Q9Y222 760 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ITGB6P18564 788 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CUL2Q13617 745 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CSHL1Q14406 222 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PLET1Q6UQ28 207 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PACS2Q86VP3 889 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ADSSL1Q8N142 457 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 CRISPLD1Q9H336 500 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 MID1IP1Q9NPA3 183 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ARAP3Q8WWN8 1544 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 NOS1APO75052 506 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 METTL18O95568 372 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 TXNP10599 105 aaKnown RBP11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF554Q86TJ5 538 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 COLGALT2Q8IYK4 626 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 STK40Q8N2I9 435 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF224Q9NZL3 707 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
VPS13A-205ENST00000376636 PLK4O00444 970 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 OAFQ86UD1 273 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 METTL16Q86W50 562 aaKnown RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 PRCCQ92733 491 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 KIAA0556O60303 1618 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 MNDAP41218 407 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 YME1L1Q96TA2 773 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 UNKQ9C0B0 810 aaKnown RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CDC42EP4Q9H3Q1 356 aaKnown RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 RPLP2P05387 115 aaKnown RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 PRLRP16471 622 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CLK2P49760 499 aaKnown RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 OR2L5Q8NG80 312 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms