RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 RHOQP17081 205 aa18.11■□□□□ 0.49
CTTN-203ENST00000376561 HTRA4P83105 476 aaPredicted RBP18.11■□□□□ 0.49
CTTN-203ENST00000376561 ACBD5Q5T8D3 534 aaPredicted RBP18.11■□□□□ 0.49
CTTN-203ENST00000376561 NUGGCQ68CJ6 796 aa18.11■□□□□ 0.49
CTTN-203ENST00000376561 ITPRIPL1Q6GPH6 555 aa18.11■□□□□ 0.49
CTTN-203ENST00000376561 FBXL22Q6P050 247 aa18.11■□□□□ 0.49
CTTN-203ENST00000376561 UBE2Q1Q7Z7E8 422 aa18.11■□□□□ 0.49
CTTN-203ENST00000376561 MPP5Q8N3R9 675 aa18.11■□□□□ 0.49
CTTN-203ENST00000376561 MRRFQ96E11 262 aaKnown RBP18.11■□□□□ 0.49
CTTN-203ENST00000376561 EBNA1BP2Q99848 306 aaKnown RBP18.11■□□□□ 0.49
CTTN-203ENST00000376561 NYNRINQ9P2P1 1898 aaKnown RBP18.11■□□□□ 0.49
CTTN-203ENST00000376561 PRRG1O14668 218 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 PIAS1O75925 651 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 FGF18O76093 207 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 CPP00450 1065 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 LINC00271P0C7V0 271 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 CREB1P16220 341 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 ELF1P32519 619 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 KCNQ1P51787 676 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 MTA1Q13330 715 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 PPIGQ13427 754 aaKnown RBP eCLIP18.1■□□□□ 0.498e-9■■□□□ 13
CTTN-203ENST00000376561 TAF12Q16514 161 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 ALFQ53S48 1182 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 HECTD3Q5T447 861 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 FIBCD1Q8N539 461 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 BADQ92934 168 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 TRMT2BQ96GJ1 504 aaKnown RBP18.1■□□□□ 0.49
CTTN-203ENST00000376561 CYTH2Q99418 400 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 PRMT1Q99873 361 aaKnown RBP18.1■□□□□ 0.49
CTTN-203ENST00000376561 DHRS4Q9BTZ2 278 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 NOL6Q9H6R4 1146 aaKnown RBP18.1■□□□□ 0.49
CTTN-203ENST00000376561 PLAC1Q9HBJ0 212 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 TMEM248Q9NWD8 314 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 PSMC3IPQ9P2W1 217 aaPredicted RBP18.1■□□□□ 0.49
CTTN-203ENST00000376561 PRKAG2Q9UGJ0 569 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 TEX28O15482 410 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 LILRB3O75022 631 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 CNTN5O94779 1100 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 CCNB1P14635 433 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 CHN1P15882 459 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 EN2P19622 333 aaPredicted RBP18.1■□□□□ 0.49
CTTN-203ENST00000376561 VEPH1Q14D04 833 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 KLHDC10Q6PID8 442 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 LEKR1Q6ZMV7 388 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 TFAP2DQ7Z6R9 452 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 GPR65Q8IYL9 337 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 TCEAL8Q8IYN2 117 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 UMODL1-AS1Q8N2C9 162 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 CNTD1Q8N815 330 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 IGSF8Q969P0 613 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 PAFAH2Q99487 392 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 NACA2Q9H009 215 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.1■□□□□ 0.493e-6■■□□□ 12.8
CTTN-203ENST00000376561 DONSONQ9NYP3 566 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 MAD1L1Q9Y6D9 718 aa18.1■□□□□ 0.49
CTTN-203ENST00000376561 ARHGAP42A6NI28 874 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 RASA4BC9J798 803 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 RASA4O43374 803 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 COCHO43405 550 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 AP2A1O95782 977 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 NFKB1P19838 968 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 STX2P32856 288 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 DMTNQ08495 405 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 TWF1Q12792 350 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 NR1H3Q13133 447 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 PLD1Q13393 1074 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 ADGRD1Q6QNK2 874 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 LRRC49Q8IUZ0 686 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 SRRM1Q8IYB3 904 aaKnown RBP18.09■□□□□ 0.49
CTTN-203ENST00000376561 ZBP1Q9H171 429 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 TTLL3Q9Y4R7 772 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 ACTL7BQ9Y614 415 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 ALPK3Q96L96 1907 aa18.09■□□□□ 0.49
CTTN-203ENST00000376561 DRGXA6NNA5 263 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 MATN3O15232 486 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 GSTA2P09210 222 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 PAPOLAP51003 745 aaKnown RBP18.08■□□□□ 0.49
CTTN-203ENST00000376561 FPGSQ05932 587 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 SPARCL1Q14515 664 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 KBTBD12Q3ZCT8 623 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 KCTD11Q693B1 232 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 NADSYN1Q6IA69 706 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 TIGD7Q6NT04 549 aaPredicted RBP18.08■□□□□ 0.49
CTTN-203ENST00000376561 UNC5AQ6ZN44 842 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 TRABD2AQ86V40 505 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 CHSY1Q86X52 802 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 USP33Q8TEY7 942 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 ZBED2Q9BTP6 218 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 CXXC1Q9P0U4 656 aaPredicted RBP18.08■□□□□ 0.49
CTTN-203ENST00000376561 STK39Q9UEW8 545 aa18.08■□□□□ 0.49
CTTN-203ENST00000376561 ERI2A8K979 691 aaKnown RBP18.08■□□□□ 0.48
CTTN-203ENST00000376561 SUN1O94901 812 aa18.08■□□□□ 0.48
CTTN-203ENST00000376561 C1QAP02745 245 aa18.08■□□□□ 0.48
CTTN-203ENST00000376561 BRAFP15056 766 aa18.08■□□□□ 0.48
CTTN-203ENST00000376561 MSH2P43246 934 aa18.08■□□□□ 0.48
CTTN-203ENST00000376561 NDST2P52849 883 aa18.08■□□□□ 0.48
CTTN-203ENST00000376561 RPRD1AQ96P16 312 aaPredicted RBP18.08■□□□□ 0.48
CTTN-203ENST00000376561 IL12RB2Q99665 862 aa18.08■□□□□ 0.48
CTTN-203ENST00000376561 TRIM56Q9BRZ2 755 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms