RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 COPG2Q9UBF2 871 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CDH22Q9UJ99 828 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 STRCQ7RTU9 1775 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MCF2P10911 925 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FDFT1P37268 417 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SFT2D3Q587I9 215 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SYPL2Q5VXT5 272 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LBX2Q6XYB7 198 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PTCD3Q96EY7 689 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MRPL1Q9BYD6 325 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 S100A14Q9HCY8 104 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 M0QZ92 97 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZBTB24O43167 697 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MT-CYBP00156 380 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PIRTP0C851 137 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FAM200BP0CF97 657 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 YBX3P16989 372 aaKnown RBP eCLIP14.68□□□□□ -0.062e-6■■□□□ 11.4
TNFRSF1B-201ENST00000376259 PGAM1P18669 254 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GRK2P25098 689 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ALDH1A3P47895 512 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TAF6P49848 677 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 IDH3AP50213 366 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SERPINB8P50452 374 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CDH13P55290 713 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FOLH1Q04609 750 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 C6orf52Q5T4I8 152 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF470Q6ECI4 717 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LCLAT1Q6UWP7 414 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KYAT3Q6YP21 454 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CHSY1Q86X52 802 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FNIP1Q8TF40 1166 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SIGLEC10Q96LC7 697 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 OLFM3Q96PB7 478 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 EPAS1Q99814 870 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ACE2Q9BYF1 805 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 POMPQ9Y244 141 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CRHR1P34998 444 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CA8P35219 290 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 OAZ1P54368 228 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MAXP61244 160 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KLF10Q13118 480 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF280DQ6N043 979 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MTHFD1LQ6UB35 978 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF567Q8N184 647 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 VPS39Q96JC1 886 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FRMD8Q9BZ67 464 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TRPC7Q9HCX4 862 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ARHGEF38Q9NXL2 777 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LNPEPQ9UIQ6 1025 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 B3GAT3O94766 335 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CYP3A5P20815 502 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 HFE2Q6ZVN8 426 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RELL1Q8IUW5 271 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 B4GALNT2Q8NHY0 566 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ARHGEF4Q9NR80 690 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 XPR1Q9UBH6 696 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ITGA11Q9UKX5 1188 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CRYL1Q9Y2S2 319 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 STYXL1Q9Y6J8 313 aa14.68□□□□□ -0.06
TNFRSF1B-201ENST00000376259 VCLP18206 1134 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ACTR3P61158 418 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 YWHAHQ04917 246 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ARL13AQ5H913 290 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FSTL4Q6MZW2 842 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 DENND6AQ8IWF6 608 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ATPAF2Q8N5M1 289 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CYGBQ8WWM9 190 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 C7orf26Q96N11 449 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SPON2Q9BUD6 331 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GATA5Q9BWX5 397 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 VPS33BQ9H267 617 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 DDX43Q9NXZ2 648 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ACOT9Q9Y305 439 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BTAF1O14981 1849 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ADGRA2Q96PE1 1338 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BNIP3LO60238 219 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RNASEH1O60930 286 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MT-ND1P03886 318 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 THRAP10827 490 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ATICP31939 592 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GABRB2P47870 512 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FAM83EQ2M2I3 478 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NOTUMQ6P988 496 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NIPA2Q8N8Q9 360 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LPPQ93052 612 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF670Q9BS34 389 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TKTL2Q9H0I9 626 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 EFR3BQ9Y2G0 817 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZBBXA8MT70 800 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ALDOAP04075 364 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GFAPP14136 432 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 VAV1P15498 845 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 L1CAMP32004 1257 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ETV4P43268 484 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BEX3Q00994 111 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SLC18A2Q05940 514 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 WASHC5Q12768 1159 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KRT72Q14CN4 511 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms