RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 DNTTP04053 509 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 HLA-EP13747 358 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 HOXD9P28356 352 aaPredicted RBP12.6□□□□□ -0.39
LSM2-208ENST00000375661 CDH5P33151 784 aaPredicted RBP12.6□□□□□ -0.39
LSM2-208ENST00000375661 KRT9P35527 623 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 PRKCIP41743 596 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 CTSKP43235 329 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 ABCG1P45844 678 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 SLC8A3P57103 927 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 YWHAGP61981 247 aaKnown RBP eCLIP12.6□□□□□ -0.39
LSM2-208ENST00000375661 CDR2Q01850 454 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 TRIP4Q15650 581 aaPredicted RBP12.6□□□□□ -0.39
LSM2-208ENST00000375661 ASIC2Q16515 512 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
LSM2-208ENST00000375661 FNDC3BQ53EP0 1204 aaKnown RBP12.6□□□□□ -0.39
LSM2-208ENST00000375661 KIAA0907Q7Z7F0 614 aaPredicted RBP12.6□□□□□ -0.39
LSM2-208ENST00000375661 ZNF677Q86XU0 584 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 AHI1Q8N157 1196 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.6□□□□□ -0.39
LSM2-208ENST00000375661 STK32AQ8WU08 396 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 BIRC7Q96CA5 298 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 PCDHB18PQ96TA0 734 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 FTSJ1Q9UET6 329 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 STOML2Q9UJZ1 356 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 MYLKQ15746 1914 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 KNL1Q8NG31 2342 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 GOLGA8CPA6NN73 597 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 H0Y8X5 98 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 ADCY5O95622 1261 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 CYP1A1P04798 512 aaPredicted RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 C1SP09871 688 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 SKILP12757 684 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 HARS2P49590 506 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 TKTL1P51854 596 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 RPS14P62263 151 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 C19orf57Q0VDD7 668 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 PDCLQ13371 301 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 TRIM14Q14142 442 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 ARID5BQ14865 1188 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 HGSNATQ68CP4 663 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 PM20D1Q6GTS8 502 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 USP30Q70CQ3 517 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 CACUL1Q86Y37 369 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 ZNF557Q8N988 423 aaPredicted RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 LSM14AQ8ND56 463 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 C1orf131Q8NDD1 294 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 ZNF397Q8NF99 534 aaPredicted RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 NDRG1Q92597 394 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 SYN2Q92777 582 aaPredicted RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 SKA1Q96BD8 255 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 NXPE2Q96DL1 559 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 AGPAT1Q99943 283 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 ULBP1Q9BZM6 244 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 HAUS4Q9H6D7 363 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 SUN2Q9UH99 717 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
LSM2-208ENST00000375661 SLCO1B1Q9Y6L6 691 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 LOC400499M0QZD8 3231 aa12.59□□□□□ -0.39
LSM2-208ENST00000375661 KNTC1P50748 2209 aa12.58□□□□□ -0.39
LSM2-208ENST00000375661 A0A1B0GTQ1 180 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 PIK3R2O00459 728 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 VILLO15195 856 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 YKT6O15498 198 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 MFAP3LO75121 409 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 ATP5BP06576 529 aaKnown RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 DLDP09622 509 aaKnown RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 CCDC172P0C7W6 258 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 UNGP13051 313 aaPredicted RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 LCP1P13796 627 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 HLA-FP30511 346 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 HNRNPH3P31942 346 aaKnown RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 HNF1BP35680 557 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 RACK1P63244 317 aaKnown RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 ADIGQ0VDE8 80 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 MPP7Q5T2T1 576 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 C6orf118Q5T5N4 469 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 ZNF776Q68DI1 518 aaPredicted RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 WDR59Q6PJI9 974 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 DHRS13Q6UX07 377 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 CHST9Q7L1S5 443 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 BHLHA9Q7RTU4 235 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 ZNF571Q7Z3V5 609 aaPredicted RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 ADAT2Q7Z6V5 191 aaKnown RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 TMEM110Q86TL2 294 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 FMNL3Q8IVF7 1028 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 CPXM1Q96SM3 734 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 ACE2Q9BYF1 805 aaPredicted RBP12.58□□□□□ -0.4
LSM2-208ENST00000375661 PDCL3Q9H2J4 239 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 LRRC4Q9HBW1 653 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 PRSS16Q9NQE7 514 aa12.58□□□□□ -0.4
LSM2-208ENST00000375661 NCKAP1Q9Y2A7 1128 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms