RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 C7P10643 843 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 CD6P30203 668 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 DPP6P42658 865 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 FOXC1Q12948 553 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 C15orf59Q2T9L4 293 aaPredicted RBP16.07■□□□□ 0.16
SDHB-201ENST00000375499 C5orf22Q49AR2 442 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 BRMS1LQ5PSV4 323 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 SLC36A4Q6YBV0 504 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 FAM131BQ86XD5 332 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 SYT12Q8IV01 421 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
SDHB-201ENST00000375499 PRCCQ92733 491 aaPredicted RBP16.07■□□□□ 0.16
SDHB-201ENST00000375499 RPL10LQ96L21 214 aaKnown RBP16.07■□□□□ 0.16
SDHB-201ENST00000375499 SYT11Q9BT88 431 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 TMEM121BQ9BXQ6 578 aaPredicted RBP16.07■□□□□ 0.16
SDHB-201ENST00000375499 WDCPQ9H6R7 721 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 CBX8Q9HC52 389 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 ITM2CQ9NQX7 267 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 SLCO3A1Q9UIG8 710 aa16.07■□□□□ 0.16
SDHB-201ENST00000375499 RALYQ9UKM9 306 aaKnown RBP16.07■□□□□ 0.16
SDHB-201ENST00000375499 ASCC3Q8N3C0 2202 aaKnown RBP16.07■□□□□ 0.16
SDHB-201ENST00000375499 CACNA1EQ15878 2313 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 A0A1B0GTH6 734 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 SMTNL1A8MU46 457 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 SIN3BO75182 1162 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 IGLV3-19P01714 112 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 ASLP04424 464 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 VAV1P15498 845 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 MAOBP27338 520 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
SDHB-201ENST00000375499 GSCP56915 257 aaPredicted RBP16.06■□□□□ 0.16
SDHB-201ENST00000375499 RPS14P62263 151 aaKnown RBP16.06■□□□□ 0.16
SDHB-201ENST00000375499 ATP11AP98196 1134 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 CDO1Q16878 200 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 HNRNPA1L2Q32P51 320 aaKnown RBP16.06■□□□□ 0.16
SDHB-201ENST00000375499 TRIM61Q5EBN2 209 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 SPDYCQ5MJ68 293 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 RABGAP1LQ5R372 815 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 TTC39BQ5VTQ0 682 aaPredicted RBP16.06■□□□□ 0.16
SDHB-201ENST00000375499 LRSAM1Q6UWE0 723 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 TRIM72Q6ZMU5 477 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 MON1BQ7L1V2 547 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 FAM124AQ86V42 546 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 LUZP1Q86V48 1076 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 MSANTD4Q8NCY6 345 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 GPR174Q9BXC1 333 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 MAGEB5Q9BZ81 275 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 SLC32A1Q9H598 525 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 TAS2R14Q9NYV8 317 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 EVLQ9UI08 416 aaPredicted RBP16.06■□□□□ 0.16
SDHB-201ENST00000375499 NEUROG3Q9Y4Z2 214 aa16.06■□□□□ 0.16
SDHB-201ENST00000375499 ITIH6Q6UXX5 1313 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 TCRBV5S1A1TA0A578 114 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 C2CD4BA6NLJ0 364 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 CDX4O14627 284 aaPredicted RBP16.05■□□□□ 0.16
SDHB-201ENST00000375499 GIPC1O14908 333 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 ECT2LQ008S8 904 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 E2F5Q15329 346 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 CCDC14Q49A88 953 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 ARCQ7LC44 396 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 IRF2BP2Q7Z5L9 587 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 RXFP2Q8WXD0 754 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 GATA6Q92908 595 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 ZNF419Q96HQ0 510 aaPredicted RBP16.05■□□□□ 0.16
SDHB-201ENST00000375499 AGPAT1Q99943 283 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 SCNM1Q9BWG6 230 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 TTYH3Q9C0H2 523 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 SEPT11Q9NVA2 429 aaKnown RBP16.05■□□□□ 0.16
SDHB-201ENST00000375499 MPP6Q9NZW5 540 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 SERGEFQ9UGK8 458 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 OR51B4Q9Y5P0 310 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 SLCO1B1Q9Y6L6 691 aa16.05■□□□□ 0.16
SDHB-201ENST00000375499 LRRC53A6NM62 1247 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 SRRM3A6NNA2 597 aaPredicted RBP16.04■□□□□ 0.16
SDHB-201ENST00000375499 NDUFS2O75306 463 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 ENDOD1O94919 500 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 SRPRAP08240 638 aaKnown RBP16.04■□□□□ 0.16
SDHB-201ENST00000375499 ACSL1P33121 698 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 NSFP46459 744 aaKnown RBP16.04■□□□□ 0.16
SDHB-201ENST00000375499 C9orf64Q5T6V5 341 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 PHF13Q86YI8 300 aaPredicted RBP16.04■□□□□ 0.16
SDHB-201ENST00000375499 CCDC117Q8IWD4 279 aaPredicted RBP16.04■□□□□ 0.16
SDHB-201ENST00000375499 PTPRN2Q92932 1015 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 PSMB7Q99436 277 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 ADAM22Q9P0K1 906 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 ZNF212Q9UDV6 495 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 CHD5Q8TDI0 1954 aa16.04■□□□□ 0.16
SDHB-201ENST00000375499 IGF2RP11717 2491 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 IGLV3-10A0A075B6K4 115 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 UPK3BL1B0FP48 263 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 UPK3BL2E5RIL1 263 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 E9PAM4 449 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 SNAP91O60641 907 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 TRIM16O95361 564 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 MOCS3O95396 460 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 F9P00740 461 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 ACADMP11310 421 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 FERP16591 822 aa16.03■□□□□ 0.16
SDHB-201ENST00000375499 RFC1P35251 1148 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms