RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CELF6Q96J87 481 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SEC16BQ96JE7 1060 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MOCS1Q9NZB8 636 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PPARGC1AQ9UBK2 798 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CDY1Q9Y6F8 540 aa18.44■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MIA3Q5JRA6 1907 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 F5H423 210 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TNRC18O15417 2968 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PIAS1O75925 651 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZWINTO95229 277 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 GBP2P32456 591 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TUBP50607 506 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 DUSP4Q13115 394 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MTA1Q13330 715 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TTC39BQ5VTQ0 682 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PRSS55Q6UWB4 352 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PIGWQ7Z7B1 504 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CNPY4Q8N129 248 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZNF276Q8N554 614 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PPM1NQ8N819 430 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ATP6V0D2Q8N8Y2 350 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 GPR152Q8TDT2 470 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ARNTL2Q8WYA1 636 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 IGSF21Q96ID5 467 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 VN1R3Q9BXE9 311 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CASS4Q9NQ75 786 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PRDM5Q9NQX1 630 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SMYD2Q9NRG4 433 aa18.43■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ANAPC1Q9H1A4 1944 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 WDR27A2RRH5 827 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CXorf49A8MYA2 514 aaPredicted RBP18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PSMD3O43242 534 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MOCS2O96007 188 aaPredicted RBP18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NFKB1P19838 968 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CA4P22748 312 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MGAT1P26572 445 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RING1Q06587 406 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 EFEMP1Q12805 493 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NAB1Q13506 487 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SPARCL1Q14515 664 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PSMD5Q16401 504 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RASIP1Q5U651 963 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZNF449Q6P9G9 518 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 C6orf89Q6UWU4 347 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RGS9BPQ6ZS82 235 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 C14orf80Q86SX3 495 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CACNA2D3Q8IZS8 1091 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 BANPQ8N9N5 519 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TTC17Q96AE7 1141 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 BTN2A3PQ96KV6 586 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 IL12RB2Q99665 862 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MLPHQ9BV36 600 aaPredicted RBP18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 UBE2OQ9C0C9 1292 aaKnown RBP18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MLXIPLQ9NP71 852 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 DONSONQ9NYP3 566 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 HSFX1Q9UBD0 423 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PTPRSQ13332 1948 aa18.42■□□□□ 0.54
HLA-DQB1-201ENST00000374943 IGLV3-10A0A075B6K4 115 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SLC38A8A6NNN8 435 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 DFFAO00273 331 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TM9SF1O15321 606 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MAFKO60675 156 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 KRT37O76014 449 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MT-ND3P03897 115 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 VIMP08670 466 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ATF6P18850 670 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RPA3P35244 121 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SLC18A2Q05940 514 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 FRG1Q14331 258 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MS4A13Q5J8X5 152 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 LGSNQ5TDP6 509 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TIGD7Q6NT04 549 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SH2D5Q6ZV89 423 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 YTHDF3Q7Z739 585 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SRLQ86TD4 932 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TAX1BP1Q86VP1 789 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CTAGE3PQ8IX95 158 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 GDAP1Q8TB36 358 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 FATE1Q969F0 183 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 OXNAD1Q96HP4 312 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZNF333Q96JL9 665 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 AGAP3Q96P47 875 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PPP1R2P1Q96PQ5 205 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SLC39A8Q9C0K1 460 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MARCH2Q9P0N8 246 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MYLKQ15746 1914 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ARHGAP42A6NI28 874 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TCP11X1B4DZS4 312 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 AP3B1O00203 1094 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MATN3O15232 486 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 UPP2O95045 317 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 JCHAINP01591 159 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SNRPAP09012 282 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CLTBP09497 229 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RHOQP17081 205 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TUFMP49411 452 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SERPINB9P50453 376 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 KPNA1P52294 538 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SESN2P58004 480 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NIPAL4Q0D2K0 466 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms