RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 DPP10Q8N608 796 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 COLGALT1Q8NBJ5 622 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 UTP15Q8TED0 518 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ASZ1Q8WWH4 475 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 APOL2Q9BQE5 337 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ABI2Q9NYB9 513 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 DUSP12Q9UNI6 340 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 SIK3Q9Y2K2 1263 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 TRPV2Q9Y5S1 764 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 MYH13Q9UKX3 1938 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 MAGEA10P43363 369 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ALDH1A3P47895 512 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 SLC11A2P49281 568 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 PCBP1Q15365 356 aaKnown RBP eCLIP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 KCTD21Q4G0X4 260 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 TDRD10Q5VZ19 366 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ARMC3Q5W041 872 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 CYP4Z2PQ8N1L4 340 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 FIG4Q92562 907 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 COPS5Q92905 334 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ZBTB45Q96K62 511 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 HMG20AQ9NP66 347 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ASTN1O14525 1302 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 MRASO14807 208 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 SNPHO15079 494 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 CRTAMO95727 393 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 GLP2RO95838 553 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ERAP2Q6P179 960 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 DHRSXQ8N5I4 330 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF483Q8TF39 744 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 PIF1Q9H611 641 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 DNAJC18Q9H819 358 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 RNPEPL1Q9HAU8 725 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM220BPB1ANY3 271 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 CABYRO75952 493 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 YY1P25490 414 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 TPP2P29144 1249 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 CDH18Q13634 790 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 C11orf88Q6PI97 169 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 B3GNT6Q6ZMB0 384 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 POU5F2Q8N7G0 328 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 B3GALNT2Q8NCR0 500 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 GLIS3Q8NEA6 775 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 WDR36Q8NI36 951 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ENKURQ8TC29 256 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ITGB1BP2Q9UKP3 347 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 NCAM2O15394 837 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 DDHD2O94830 711 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 PARNO95453 639 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 NFIL3Q16649 462 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 NDUFA5Q16718 116 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 DGKKQ5KSL6 1271 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ANKRD23Q86SG2 305 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ELOVL6Q9H5J4 265 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 AVENQ9NQS1 362 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ARMCX1Q9P291 453 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ENOPH1Q9UHY7 261 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 TNFSF13BQ9Y275 285 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 MYH6P13533 1939 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 TMEM114B3SHH9 223 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 UBXN8O00124 270 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 PAEPP09466 180 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ITGALP20701 1170 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 ELAVL2Q12926 359 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 TRAF3Q13114 568 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 CBWD6Q4V339 395 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 CBWD3Q5JTY5 395 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 SAMD4BQ5PRF9 694 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 CBWD5Q5RIA9 395 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 DLG3Q92796 817 aa12.51□□□□□ -0.41
NPLOC4-202ENST00000374747 GNG14A0A1W2PPG7 69 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 NFKBIEO00221 500 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 MT-CO1P00395 513 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 JCHAINP01591 159 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 ALOX12P18054 663 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 CD151P48509 253 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 MAD2L1Q13257 205 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 EIF1ADQ8N9N8 165 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 RXFP2Q8WXD0 754 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 KAT2BQ92831 832 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 UGT2B28Q9BY64 529 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 UBXN6Q9BZV1 441 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 HMX1Q9NP08 348 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 STARD13Q9Y3M8 1113 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 F5H5T6 163 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms