RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CMTR2Q8IYT2 770 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 TMEM132CQ8N3T6 1108 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 MMGT1Q8N4V1 131 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 AGBL3Q8NEM8 1001 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ACER1Q8TDN7 264 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SMCR8Q8TEV9 937 aaPredicted RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 ASB10Q8WXI3 467 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SLC9A6Q92581 669 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ZBED3Q96IU2 234 aaPredicted RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 MMS19Q96T76 1030 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 HSD17B14Q9BPX1 270 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 EIF2AK1Q9BQI3 630 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 ZNF700Q9H0M5 742 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 MANSC1Q9H8J5 431 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 PRDM16Q9HAZ2 1276 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 TMEM74BQ9NUR3 256 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 STK32BQ9NY57 414 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 AIPL1Q9NZN9 384 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 KCND2Q9NZV8 630 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 TBC1D7Q9P0N9 293 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 HDAC6Q9UBN7 1215 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 RNF14Q9UBS8 474 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SEL1LQ9UBV2 794 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ARMCX3Q9UH62 379 aaPredicted RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 PGAP2Q9UHJ9 254 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ZNHIT2Q9UHR6 403 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 FEM1BQ9UK73 627 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 TFR2Q9UP52 801 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 MRPL11Q9Y3B7 192 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 DAAM1Q9Y4D1 1078 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 HYOU1Q9Y4L1 999 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 PCDHGA2Q9Y5H1 932 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 BZW2Q9Y6E2 419 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 RLFQ13129 1914 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ASTN1O14525 1302 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ZMYM2Q9UBW7 1377 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 PHIPQ8WWQ0 1821 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 KIAA1217Q5T5P2 1943 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 A0A1B0GTW7 788 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 MACROD2A1Z1Q3 448 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 TCP10L2B9ZVM9 353 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 GFPT2O94808 682 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 SLITRK3O94933 977 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 MOCS3O95396 460 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 NR3C1P04150 777 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 ASNSP08243 561 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 RHOXF2BP0C7M4 288 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 MYBP10242 640 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 EPB41P11171 864 aaKnown RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 ALAS1P13196 640 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 FPR1P21462 350 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 TNFRSF8P28908 595 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 PCSK1P29120 753 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 HOXA13P31271 388 aaPredicted RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 CYP2C19P33261 490 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 EPS15P42566 896 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 WASP42768 502 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 AARSP49588 968 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP48-202ENST00000374730 HSD17B4P51659 736 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 POLR2FP61218 127 aaKnown RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 PSMC6P62333 389 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 OCA2Q04671 838 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 GFPT1Q06210 699 aaPredicted RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 SCAPQ12770 1279 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 MYBPC2Q14324 1141 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 CASP8Q14790 479 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 UBXN2BQ14CS0 331 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 SLC18A3Q16572 532 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 C4orf46Q504U0 113 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 CEP55Q53EZ4 464 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 TDRD12Q587J7 1177 aaKnown RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 KIAA1755Q5JYT7 1200 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 B3GNTL1Q67FW5 361 aaPredicted RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 CCDC70Q6NSX1 233 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 RINT1Q6NUQ1 792 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 TSHZ1Q6ZSZ6 1077 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 STXBP4Q6ZWJ1 553 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 C1orf186Q6ZWK4 172 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 ZNF771Q7L3S4 317 aaPredicted RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 NIPA1Q7RTP0 329 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 SAMD3Q8N6K7 520 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 GOLGA5Q8TBA6 731 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 CAGE1Q8TC20 777 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 TMEM174Q8WUU8 243 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 CAVIN3Q969G5 261 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 EXOC4Q96A65 974 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 BOD1Q96IK1 185 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 CAMKK2Q96RR4 588 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 OSBPL9Q96SU4 736 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 RIT2Q99578 217 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 RHOXF2Q9BQY4 288 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 TEKT3Q9BXF9 490 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 BHMT2Q9H2M3 363 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 LDAHQ9H6V9 325 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 SYNPO2LQ9H987 977 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 MLXIPQ9HAP2 919 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 MED4Q9NPJ6 270 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 NLRC4Q9NPP4 1024 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 PSD3Q9NYI0 1048 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 RNF181Q9P0P0 153 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms