RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 NMRK1Q9NWW6 199 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 SHROOM3Q8TF72 1996 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 MSI1O43347 362 aaKnown RBP17.45■□□□□ 0.38
RXRB-201ENST00000374680 LRIG2O94898 1065 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 RALBP11234 206 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 KCNE1P15382 129 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 NMBRP28336 390 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 CD68P34810 354 aaPredicted RBP17.45■□□□□ 0.38
RXRB-201ENST00000374680 POU6F1Q14863 301 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 SDHAF4Q5VUM1 108 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 ZNF467Q7Z7K2 595 aaPredicted RBP17.45■□□□□ 0.38
RXRB-201ENST00000374680 FBXO41Q8TF61 875 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 DNAJC9Q8WXX5 260 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 SFMBT1Q9UHJ3 866 aa17.45■□□□□ 0.38
RXRB-201ENST00000374680 GLTPD2A6NH11 291 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 DCLK1O15075 740 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 PSMG1O95456 288 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 LTFP02788 710 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 ZNF865P0CJ78 1059 aaPredicted RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 PGFP49763 221 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 DPYSQ14117 519 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 TIGD5Q53EQ6 642 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 C1orf146Q5VVC0 180 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 IL31Q6EBC2 164 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 SCG3Q8WXD2 468 aaKnown RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 SGF29Q96ES7 293 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 GORASP1Q9BQQ3 440 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 COLEC11Q9BWP8 271 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 APOBEC2Q9Y235 224 aaKnown RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 SNNO75324 88 aaPredicted RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 THP07101 528 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 CRYBB1P53674 252 aaPredicted RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 FSCN1Q16658 493 aaKnown RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 NAPRTQ6XQN6 538 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 MAVSQ7Z434 540 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 PSTKQ8IV42 348 aaKnown RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 SCUBE1Q8IWY4 988 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 PPP4R1Q8TF05 950 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 UCMAQ8WVF2 138 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 SPDL1Q96EA4 605 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 MLPHQ9BV36 600 aaPredicted RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 A0A096LPK6 155 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 CAPN14A8MX76 684 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 KLF11O14901 512 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 GLRA3O75311 464 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 WFS1O76024 890 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 PRKCGP05129 697 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 OR4Q2P0C623 313 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 CPA3P15088 417 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 WARSP23381 471 aaKnown RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 PEX19P40855 299 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 ATXN3P54252 364 aaPredicted RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 MARK2Q7KZI7 788 aaKnown RBP17.44■□□□□ 0.38
RXRB-201ENST00000374680 IPMKQ8NFU5 416 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 TLE6Q9H808 572 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 FAM105AQ9NUU6 356 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 FIS1Q9Y3D6 152 aa17.44■□□□□ 0.38
RXRB-201ENST00000374680 MKI67P46013 3256 aaKnown RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 NVLO15381 856 aaKnown RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 DCXO43602 365 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 MSX2P35548 267 aaPredicted RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 GP5P40197 560 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 MAP2K5Q13163 448 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 CTBP1Q13363 440 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 ANKRD20A4Q4UJ75 823 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 RIPOR1Q6ZS17 1223 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 PHTF2Q8N3S3 785 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 ZNF781Q8N8C0 355 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.43■□□□□ 0.38
RXRB-201ENST00000374680 SLC24A3Q9HC58 644 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 TMLHEQ9NVH6 421 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 TAGLN3Q9UI15 199 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 HOXD8P13378 290 aaPredicted RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 GLUD2P49448 558 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 ADAM17P78536 824 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 TAF1CQ15572 869 aaPredicted RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 CFAP157Q5JU67 520 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 C4orf22Q6V702 233 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 ANKRD23Q86SG2 305 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 TOP6BLQ8N6T0 577 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 SCYL1Q96KG9 808 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 PPP1R10Q96QC0 940 aaKnown RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 WDR55Q9H6Y2 383 aaPredicted RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 AGO3Q9H9G7 860 aaKnown RBP17.43■□□□□ 0.38
RXRB-201ENST00000374680 COPG2Q9UBF2 871 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 SLC7A8Q9UHI5 535 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 SUFUQ9UMX1 484 aa17.43■□□□□ 0.38
RXRB-201ENST00000374680 ARL5CA6NH57 179 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 PMPCBO75439 489 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 ALDH1A2O94788 518 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 HSPA4LO95757 839 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 PROCP04070 461 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 CHRNGP07510 517 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 KRT72Q14CN4 511 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 NOMO2Q5JPE7 1267 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms