RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ACBD5Q5T8D3 534 aaPredicted RBP16.1■□□□□ 0.17
NIPAL3-204ENST00000374399 CHSY1Q86X52 802 aa16.1■□□□□ 0.17
NIPAL3-204ENST00000374399 AGGF1Q8N302 714 aaeCLIP16.1■□□□□ 0.17
NIPAL3-204ENST00000374399 SMPD4Q9NXE4 827 aa16.1■□□□□ 0.17
NIPAL3-204ENST00000374399 STOML2Q9UJZ1 356 aa16.1■□□□□ 0.17
NIPAL3-204ENST00000374399 HELZP42694 1942 aaKnown RBP16.1■□□□□ 0.17
NIPAL3-204ENST00000374399 TNRC18O15417 2968 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 A0A1W2PRU2 124 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 EPOPA6NHQ4 379 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 DFFAO00273 331 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 GFRA2O00451 464 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 OPHN1O60890 802 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 PEX11BO96011 259 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 NUDT17P0C025 328 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 IRF1P10914 325 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 MBL2P11226 248 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 HDCP19113 662 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 HARS2P49590 506 aaKnown RBP16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 FAM193AP78312 1265 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 ZNF33AQ06730 810 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 ZNF844Q08AG5 666 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 MTA1Q13330 715 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 POTEHQ6S545 545 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 LRRC31Q6UY01 552 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 C4orf22Q6V702 233 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 Q6ZNB5 142 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 ZNF534Q76KX8 674 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 CCDC13Q8IYE1 715 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 LGI2Q8N0V4 545 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 CNTD1Q8N815 330 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 RPRD1AQ96P16 312 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 CORO1BQ9BR76 489 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 SEPT10Q9P0V9 454 aa16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 DNMT3BQ9UBC3 853 aaKnown RBP16.09■□□□□ 0.17
NIPAL3-204ENST00000374399 ALOX15BO15296 676 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 TTC4O95801 387 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 CCNCP24863 283 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 ACTN2P35609 894 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 MAGEA4P43358 317 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 PAPOLAP51003 745 aaKnown RBP16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 NDST2P52849 883 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 SLC7A9P82251 487 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 KYNUQ16719 465 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 LRIG3Q6UXM1 1119 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 RTL10Q7L3V2 364 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 CAND1Q86VP6 1230 aaKnown RBP16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 CFAP52Q8N1V2 620 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 MAB21L3Q8N8X9 362 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 SHKBP1Q8TBC3 707 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 TCEAL4Q96EI5 215 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 SLC46A2Q9BY10 475 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 PHACTR1Q9C0D0 580 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 TSPYL1Q9H0U9 437 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 NKX2-4Q9H2Z4 354 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 IGSF9Q9P2J2 1179 aa16.08■□□□□ 0.17
NIPAL3-204ENST00000374399 PDE4DIPQ5VU43 2346 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 F5H423 210 aaPredicted RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 F5H5T6 163 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 SMAPO00193 183 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 TRDMT1O14717 391 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 NDC80O14777 642 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 SCAMP3O14828 347 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 ZBTB24O43167 697 aaPredicted RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 MYL4P12829 197 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 PSMB4P28070 264 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 SLC11A2P49281 568 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 RPS24P62847 133 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 MTM1Q13496 603 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 HIF1AQ16665 826 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 PDE12Q6L8Q7 609 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 ARHGEF18Q6ZSZ5 1173 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 OR52K2Q8NGK3 314 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 MRPS31Q92665 395 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 ARL8AQ96BM9 186 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 ZNF707Q96C28 371 aaPredicted RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 HMCESQ96FZ2 354 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 C9orf72Q96LT7 481 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 ATXN3LQ9H3M9 355 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 SAYSD1Q9NPB0 183 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 ASAH2Q9NR71 780 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 HCFC2Q9Y5Z7 792 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 CPQQ9Y646 472 aa16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 ZFP37Q9Y6Q3 630 aaPredicted RBP16.08■□□□□ 0.16
NIPAL3-204ENST00000374399 CLUHO75153 1309 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 AVILO75366 819 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 APRTP07741 180 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 TPSB2P20231 275 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 CDC25CP30307 473 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 HOXA9P31269 272 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 GRIA1P42261 906 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 MAGEA3P43357 314 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 IFI35P80217 286 aaPredicted RBP16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 TPSAB1Q15661 275 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 SLC5A9Q2M3M2 681 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 TEX44Q53QW1 395 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 HP1BP3Q5SSJ5 553 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms