RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 GRIK4Q16099 956 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 CELF6Q96J87 481 aaKnown RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 ZBTB45Q96K62 511 aaPredicted RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 CNTNAP2Q9UHC6 1331 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RAD51BO15315 384 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 ITGALP20701 1170 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 GSTT1P30711 240 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 CCR1P32246 355 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 KPNA1P52294 538 aaPredicted RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 TRAF2Q12933 501 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 SLC9A9Q8IVB4 645 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 KAT5Q92993 513 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 SYT15Q9BQS2 421 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 UNKQ9C0B0 810 aaKnown RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 POMKQ9H5K3 350 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RNPEPL1Q9HAU8 725 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 INSRRP14616 1297 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 S100A1P23297 94 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 CHKAP35790 457 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 SKIV2L2P42285 1042 aaKnown RBP14.46□□□□□ -0.09
LMX1B-202ENST00000373474 SLC15A2Q16348 729 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 SCUBE3Q8IX30 993 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 SIX5Q8N196 739 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 POU5F2Q8N7G0 328 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 TRPC4APQ8TEL6 797 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 CHID1Q9BWS9 393 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 SPATC1LQ9H0A9 340 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 CRNNQ9UBG3 495 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-202ENST00000373474 VIRMAQ69YN4 1812 aaKnown RBP14.46□□□□□ -0.09
LMX1B-202ENST00000373474 ROBO3Q96MS0 1386 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 ITGAVP06756 1048 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 ME2P23368 584 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 YWHAZP63104 245 aaKnown RBP14.46□□□□□ -0.09
LMX1B-202ENST00000373474 PWP1Q13610 501 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 KCNT2Q6UVM3 1135 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 CRELD2Q6UXH1 353 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-202ENST00000373474 C16orf62Q7Z3J2 963 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 CARNMT1Q8N4J0 409 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 REPS2Q8NFH8 660 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 FAM136AQ96C01 138 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 KIFC1Q9BW19 673 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 DUSP12Q9UNI6 340 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 SORCS3Q9UPU3 1222 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 NDUFAF1Q9Y375 327 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 CCNG1P51959 295 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 CDH8P55286 799 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 BMT2Q1RMZ1 405 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 PARP6Q2NL67 630 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 C15orf52Q6ZUT6 534 aaKnown RBP14.46□□□□□ -0.09
LMX1B-202ENST00000373474 PRELID2Q8N945 189 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 ZNF398Q8TD17 642 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 S100ZQ8WXG8 99 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 DLG3Q92796 817 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 PHF21BQ96EK2 531 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 PORCNQ9H237 461 aa14.46□□□□□ -0.09
LMX1B-202ENST00000373474 TRIM43BA6NCK2 446 aa14.46□□□□□ -0.1
LMX1B-202ENST00000373474 EFCAB10A6NFE3 127 aa14.46□□□□□ -0.1
LMX1B-202ENST00000373474 RPLP2P05387 115 aaKnown RBP14.46□□□□□ -0.1
LMX1B-202ENST00000373474 MARSP56192 900 aaKnown RBP14.46□□□□□ -0.1
LMX1B-202ENST00000373474 ITGADQ13349 1161 aa14.46□□□□□ -0.1
LMX1B-202ENST00000373474 NBPF12Q5TAG4 269 aaPredicted RBP14.46□□□□□ -0.1
LMX1B-202ENST00000373474 TYW3Q6IPR3 259 aaKnown RBP14.46□□□□□ -0.1
LMX1B-202ENST00000373474 SLC27A1Q6PCB7 646 aa14.46□□□□□ -0.1
LMX1B-202ENST00000373474 SNX32Q86XE0 403 aa14.46□□□□□ -0.1
LMX1B-202ENST00000373474 PIH1D1Q9NWS0 290 aaKnown RBP14.46□□□□□ -0.1
LMX1B-202ENST00000373474 SLC12A8A0AV02 714 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MEIS2O14770 477 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 RHOCP08134 193 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 ALOX5P09917 674 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 DNAJB2P25686 324 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 FMO1Q01740 532 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MAD2L1Q13257 205 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-202ENST00000373474 TMEM139Q8IV31 216 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 SYTL1Q8IYJ3 562 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MIER2Q8N344 545 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 AGAP11Q8TF27 550 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MLPHQ9BV36 600 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-202ENST00000373474 E5RJQ4 531 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MRASO14807 208 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 ATG7O95352 703 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 JAK1P23458 1154 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 LGALS3BPQ08380 585 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MARC1Q5VT66 337 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MZT2AQ6P582 158 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 IRF2BP2Q7Z5L9 587 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 OSMRQ99650 979 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 ZNF682O95780 498 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 TRUB2O95900 331 aaKnown RBP14.45□□□□□ -0.1
LMX1B-202ENST00000373474 LDLRP01130 860 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 NEDD8Q15843 81 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 CES3Q6UWW8 571 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 DEFB106AQ8N104 65 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 SMARCD1Q96GM5 515 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 FAM220BPB1ANY3 271 aa14.45□□□□□ -0.1
LMX1B-202ENST00000373474 TPD52L2O43399 206 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms