RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 FAM149B1Q96BN6 582 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 GRAMD1AQ96CP6 724 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 OXNAD1Q96HP4 312 aaPredicted RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 ZFP42Q96MM3 310 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CSPG4P5Q96PW8 444 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 RSRP1Q9BUV0 290 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 NFKBIZQ9BYH8 718 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 TNKS2Q9H2K2 1166 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CYP3A43Q9HB55 503 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ARHGEF4Q9NR80 690 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SEPT10Q9P0V9 454 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ITGA11Q9UKX5 1188 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 PCDHGB3Q9Y5G1 929 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SNX10Q9Y5X0 201 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 C5orf42Q9H799 3197 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 TMEM229AB2RXF0 380 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 KCNK1O00180 336 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 PDHXO00330 501 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 COPEO14579 308 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CXCL11O14625 94 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CHADO15335 359 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ITM2AO43736 263 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 GPR32O75388 356 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 AVPP01185 164 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 MMP3P08254 477 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ATICP31939 592 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 STIP1P31948 543 aaKnown RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 ARRB2P32121 409 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SLC18A1P54219 525 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SLC18A2Q05940 514 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ADIGQ0VDE8 80 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 PPIL2Q13356 520 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CHI3L2Q15782 390 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 C9orf57Q5W0N0 161 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 FAM219BQ5XKK7 198 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 TRIM68Q6AZZ1 485 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CASC4Q6P4E1 433 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 TMEM110Q86TL2 294 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SLC26A11Q86WA9 606 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 OSTM1Q86WC4 334 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ARID3BQ8IVW6 561 aaPredicted RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 ADGRF2Q8IZF7 708 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 NPLOC4Q8TAT6 608 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 DNAJB3Q8WWF6 145 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 USP6NLQ92738 828 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 AZIN2Q96A70 460 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SNX27Q96L92 541 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 NUDCD1Q96RS6 583 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SHCBP1LQ9BZQ2 653 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ADAMTS10Q9H324 1103 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 TXLNGQ9NUQ3 528 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 C2CD2Q9Y426 696 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 TIMM13Q9Y5L4 95 aaPredicted RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 USP34Q70CQ2 3546 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 TSC2P49815 1807 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 IQANK1A0A1B0GTG1 560 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 MEI4A8MW99 385 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 BTBD19C9JJ37 291 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 TM9SF1O15321 606 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 DCTN3O75935 186 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 SORBS2O94875 1100 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 STAU1O95793 577 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 APOEP02649 317 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 P4HA1P13674 534 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ATP2A2P16615 1042 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 TYRP1P17643 537 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 GRM5P41594 1212 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ARFIP2P53365 341 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 CLNS1AP54105 237 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 CACNA2D1P54289 1103 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 TNFAIP2Q03169 654 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 NME3Q13232 169 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 PEX6Q13608 980 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 LAMC2Q13753 1193 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 TFDP2Q14188 446 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 NAA25Q14CX7 972 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 RASA2Q15283 850 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ZBTB6Q15916 424 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 DCAF6Q58WW2 860 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 SLC45A4Q5BKX6 768 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 KIAA0319Q5VV43 1072 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 FYB2Q5VWT5 728 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 CEP128Q6ZU80 1094 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 DEFB106AQ8N104 65 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 NDUFAF2Q8N183 169 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 DTX3LQ8TDB6 740 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 PTCD3Q96EY7 689 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 ZNF778Q96MU6 729 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 AGAP3Q96P47 875 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 C11orf84Q9BUA3 381 aaPredicted RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 OXCT2Q9BYC2 517 aaPredicted RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 VPS11Q9H270 941 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 MROH8Q9H579 483 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 NOP53Q9NZM5 478 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 PAK5Q9P286 719 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ZMYM5Q9UJ78 669 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 PIN4Q9Y237 131 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms