RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 RNASE9P60153 205 aaKnown RBP19.45■□□□□ 0.7
TMEM53-201ENST00000372235 CCDC15Q0P6D6 951 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 STX1AQ16623 288 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 FAM46CQ5VWP2 391 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 MMS22LQ6ZRQ5 1243 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 SETD3Q86TU7 594 aaPredicted RBP19.45■□□□□ 0.7
TMEM53-201ENST00000372235 APCDD1Q8J025 514 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 CCDC114Q96M63 670 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 TKTL2Q9H0I9 626 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 C6orf106Q9H6K1 298 aaPredicted RBP19.45■□□□□ 0.7
TMEM53-201ENST00000372235 VANGL2Q9ULK5 521 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 TBC1D30Q9Y2I9 924 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 FARP1Q9Y4F1 1045 aaPredicted RBP19.45■□□□□ 0.7
TMEM53-201ENST00000372235 PCDHGB2Q9Y5G2 931 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 PCDH15Q96QU1 1955 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 TTC34A8MYJ7 566 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 ALOX15BO15296 676 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 GJB3O75712 270 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 SLC8A1P32418 973 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 MYL5Q02045 173 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 ZNF423Q2M1K9 1284 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 TAF3Q5VWG9 929 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 KIAA0895LQ68EN5 471 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 XYLT1Q86Y38 959 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 MMAAQ8IVH4 418 aaKnown RBP19.44■□□□□ 0.7
TMEM53-201ENST00000372235 OR2T34Q8NGX1 318 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 C1orf216Q8TAB5 229 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 EPS8L1Q8TE68 723 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 BIRC7Q96CA5 298 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 FEM1AQ9BSK4 669 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 C2orf49Q9BVC5 232 aaPredicted RBP19.44■□□□□ 0.7
TMEM53-201ENST00000372235 NAT10Q9H0A0 1025 aaKnown RBP19.44■□□□□ 0.7
TMEM53-201ENST00000372235 VPS16Q9H269 839 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 KDM4CQ9H3R0 1056 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 RETREG1Q9H6L5 497 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 FSCN3Q9NQT6 498 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 PIGVQ9NUD9 493 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 VPS28Q9UK41 221 aa19.44■□□□□ 0.7
TMEM53-201ENST00000372235 SLC7A4O43246 635 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 RNASEH2AO75792 299 aaKnown RBP19.43■□□□□ 0.7
TMEM53-201ENST00000372235 FSBPO95073 299 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 CCDC172P0C7W6 258 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 CD59P13987 128 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 GOT1P17174 413 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 CDK11BP21127 795 aaKnown RBP19.43■□□□□ 0.7
TMEM53-201ENST00000372235 SOX5P35711 763 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 NUDT1P36639 197 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 STAT1P42224 750 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 SIM1P81133 766 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-201ENST00000372235 CDR2Q01850 454 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 FOXC1Q12948 553 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 KRT31Q15323 416 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 ARL13BQ3SXY8 428 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 C6orf118Q5T5N4 469 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 CXorf57Q6NSI4 855 aaKnown RBP19.43■□□□□ 0.7
TMEM53-201ENST00000372235 ADAT2Q7Z6V5 191 aaKnown RBP19.43■□□□□ 0.7
TMEM53-201ENST00000372235 NOP9Q86U38 636 aaKnown RBP19.43■□□□□ 0.7
TMEM53-201ENST00000372235 OR8D1Q8WZ84 308 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 PTPRN2Q92932 1015 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 IGSF8Q969P0 613 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 RPL10LQ96L21 214 aaKnown RBP19.43■□□□□ 0.7
TMEM53-201ENST00000372235 HAPLN3Q96S86 360 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 SIK2Q9H0K1 926 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 GAREM1Q9H706 876 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 SLCO3A1Q9UIG8 710 aa19.43■□□□□ 0.7
TMEM53-201ENST00000372235 NCOR2Q9Y618 2525 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 C1QTNF3-AMACRE9PGA6 284 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 MID1O15344 667 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 ATP9BO43861 1147 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 IL1BP01584 269 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 MZF1P28698 734 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-201ENST00000372235 CTSOP43234 321 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-201ENST00000372235 CCR5P51681 352 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 POLR2FP61218 127 aaKnown RBP19.42■□□□□ 0.7
TMEM53-201ENST00000372235 RACK1P63244 317 aaKnown RBP19.42■□□□□ 0.7
TMEM53-201ENST00000372235 NOMO3P69849 1222 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 SYCP1Q15431 976 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 ACCSLQ4AC99 568 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 SLC45A4Q5BKX6 768 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 ZNF783Q6ZMS7 281 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 NAXDQ8IW45 347 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 NEK11Q8NG66 645 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 GPT2Q8TD30 523 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 PCMTD1Q96MG8 357 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-201ENST00000372235 MUC3BQ9H195 1237 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 GANQ9H2C0 597 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 FAM207AQ9NSI2 230 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-201ENST00000372235 FANCLQ9NW38 375 aa19.42■□□□□ 0.7
TMEM53-201ENST00000372235 A0A1W2PP55 124 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 A0A1W2PPC4 97 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 LRRC10BA6NIK2 292 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 FLRT2O43155 660 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 GFPT2O94808 682 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 RHOCP08134 193 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 MMEP08473 750 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 ZNF18P17022 549 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 CLCN6P51797 869 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 GALCP54803 685 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 TRIP6Q15654 476 aaKnown RBP19.41■□□□□ 0.7
TMEM53-201ENST00000372235 ST3GAL2Q16842 350 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms