RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 BFSP1Q12934 665 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TRIM32Q13049 653 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 ALCAMQ13740 583 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PTK2BQ14289 1009 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 STILQ15468 1287 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CEP78Q5JTW2 689 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PDE12Q6L8Q7 609 aaKnown RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 BNC2Q6ZN30 1099 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 EEPD1Q7L9B9 569 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 AMIGO2Q86SJ2 522 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 DNAAF5Q86Y56 855 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 DCP2Q8IU60 420 aaKnown RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 SLITRK4Q8IW52 837 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 C4orf19Q8IY42 314 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 POU5F2Q8N7G0 328 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 C12orf50Q8NA57 414 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 RBM15BQ8NDT2 890 aaKnown RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 RAB3IL1Q8TBN0 382 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PYDC1Q8WXC3 89 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TMIGD2Q96BF3 282 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 VMP1Q96GC9 406 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 DCUN1D1Q96GG9 259 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CALN1Q9BXU9 219 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GPR88Q9GZN0 384 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 HOXD1Q9GZZ0 328 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 HIPK3Q9H422 1215 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 SCUBE2Q9NQ36 999 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PXMP2Q9NR77 195 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 AAASQ9NRG9 546 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 NDFIP2Q9NV92 336 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 DNAJC12Q9UKB3 198 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 ILVBLA1L0T0 632 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 CAPN8A6NHC0 703 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 SNTNA6NMZ2 147 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 B8ZZF3 427 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 M0QX08 132 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 DDX3YO15523 660 aaKnown RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 CCNE2O96020 404 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ALOX5P09917 674 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 HSPA6P17066 643 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 TFE3P19532 575 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 BACE1P56817 501 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 DSTNP60981 165 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 NFKB2Q00653 900 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 MYL7Q01449 175 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 DRAP1Q14919 205 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 UGCGQ16739 394 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 EFHC1Q5JVL4 640 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 DCAF12L1Q5VU92 463 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 PEAR1Q5VY43 1037 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 PPP4R4Q6NUP7 873 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 IYDQ6PHW0 289 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 C12orf56Q8IXR9 622 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 TSPAN14Q8NG11 270 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 SLC30A5Q8TAD4 765 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 OLIG1Q8TAK6 271 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 MAML1Q92585 1016 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ZNF75CPQ92670 426 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ZNF486Q96H40 463 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 WNK4Q96J92 1243 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 CLPTM1LQ96KA5 538 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 C7orf26Q96N11 449 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ACCSQ96QU6 501 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 FERD3LQ96RJ6 166 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 APBA2Q99767 749 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 SH2D3AQ9BRG2 576 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 SLC2A11Q9BYW1 496 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 INTS2Q9H0H0 1204 aaKnown RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 KIAA1586Q9HCI6 787 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 APEX2Q9UBZ4 518 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 SMG5Q9UPR3 1016 aaKnown RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 APOBEC2Q9Y235 224 aaKnown RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 RIPK3Q9Y572 518 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 AP4B1Q9Y6B7 739 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 MYOCOSA0A1B0GUC4 107 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 TMEM150BA6NC51 233 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 FADS2P1A8MWK0 482 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 TISP43B9A030 160 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 H3BRJ5 948 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 PSMD11O00231 422 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 PSMD12O00232 456 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 H2AFZP0C0S5 128 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 GRNP28799 593 aaKnown RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ERFP50548 548 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 BMXP51813 675 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 JAK3P52333 1124 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ZNF135P52742 658 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 GNG2P59768 71 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 PSMC5P62195 406 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 GTF2BQ00403 316 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 NPTX1Q15818 432 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 GRAMD1BQ3KR37 738 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 TM4SF20Q53R12 229 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ARHGEF16Q5VV41 709 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 SLX4IPQ5VYV7 408 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 MRM1Q6IN84 353 aaKnown RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 CCBE1Q6UXH8 406 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-203ENST00000372232 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 H2AFVQ71UI9 128 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 HAUS6Q7Z4H7 955 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms