RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TFE3P19532 575 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 KPNA1P52294 538 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 MTFR1Q15390 333 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZNF671Q8TAW3 534 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 MFSD1Q9H3U5 465 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 NEU2Q9Y3R4 380 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 RNASEH1O60930 286 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 XYLBO75191 536 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 GPD1P21695 349 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 ABL2P42684 1182 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 FLT3LGP49771 235 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 TCHHL1Q5QJ38 904 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 C12orf50Q8NA57 414 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 KLRG1Q96E93 195 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 BDH2Q9BUT1 245 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 TRPV5Q9NQA5 729 aa14.32□□□□□ -0.12
RAPGEF1-202ENST00000372190 PSMD3O43242 534 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 PIGHQ14442 188 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 PPM1LQ5SGD2 360 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ANKS6Q68DC2 871 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 BHLHB9Q6PI77 547 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 VGLL2Q8N8G2 317 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 TRAPPC12Q8WVT3 735 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ATXN7L3BQ96GX2 97 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ROBO1Q9Y6N7 1651 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 DHFRP00374 187 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 SNRPAP09012 282 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ACO1P21399 889 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 HSD3B2P26439 372 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 SOAT1P35610 550 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 CCL23P55773 120 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 SMAD1Q15797 465 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 FAM171A1Q5VUB5 890 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 UTS2BQ765I0 119 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 FAR2Q96K12 515 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 SPATA16Q9BXB7 569 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 IL25Q9H293 177 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 PCDHB2Q9Y5E7 798 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 F5H5T6 163 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ATP9BO43861 1147 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 PRMT3O60678 531 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 PSIP1O75475 530 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 MAPK10P53779 464 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 CELF3Q5SZQ8 465 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZNF280BQ86YH2 543 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 CARNS1A5YM72 827 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 C3orf70A6NLC5 250 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 TLR2O60603 784 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 IFNA14P01570 189 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 UCHL3P15374 230 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 RPL5P46777 297 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 PRIM2P49643 509 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 RBBP4Q09028 425 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 CUL2Q13617 745 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 FUT11Q495W5 492 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 TREML2Q5T2D2 321 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 SLC27A1Q6PCB7 646 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 OSBPL6Q9BZF3 934 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 METTL21EPA6NDL7 271 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZBTB48P10074 688 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ETFBP38117 255 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ACOT1Q86TX2 421 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 ARID3BQ8IVW6 561 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 PNPT1Q8TCS8 783 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 RSAD1Q9HA92 442 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 NMRK2Q9NPI5 230 aa14.31□□□□□ -0.12
RAPGEF1-202ENST00000372190 KCNN4O15554 427 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 THEGLP0DJG4 465 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 GRK4P32298 578 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 RHBDL3P58872 404 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 AK5Q9Y6K8 562 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 C9IYK1 514 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 PLOD3O60568 738 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 GARTP22102 1010 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 SOX10P56693 466 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 GJA9P57773 515 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 CARNMT1Q8N4J0 409 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 KRT35Q92764 455 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 SERPINB12Q96P63 405 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 COMMD8Q9NX08 183 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 PPM1BO75688 479 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 RAP1GAPP47736 663 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 ANXA11P50995 505 aaKnown RBP14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 PGDP52209 483 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 MIB1Q86YT6 1006 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 HERC6Q8IVU3 1022 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 ELOA2Q8IYF1 753 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 EID3Q8N140 333 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 DHRSXQ8N5I4 330 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 C9orf16Q9BUW7 83 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 YIPF2Q9BWQ6 316 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 COPS7BQ9H9Q2 264 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 TMCC2O75069 709 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 ACADMP11310 421 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 SMU1Q2TAY7 513 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 ZNF677Q86XU0 584 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms