RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TMCO1Q9UM00 188 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 WASF2Q9Y6W5 498 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 FNDC1Q4ZHG4 1894 aaPredicted RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TMEM265A0A087WTH1 108 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TCRBV9S1A1TA0A576 114 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CARNS1A5YM72 827 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 F8VP50 259 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 H3BRJ5 948 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 APOC4-APOC2K7ER74 178 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 BUD23O43709 281 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PEX1O43933 1283 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 KLHL2O95198 593 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CALCAP01258 141 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 APOC2P02655 101 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 MYL4P12829 197 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TAF6P49848 677 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 LILRA4P59901 499 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 MYL6P60660 151 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CDC16Q13042 620 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 NCOA4Q13772 614 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 DPYSL3Q14195 570 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 BBS9Q3SYG4 887 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TIGD5Q53EQ6 642 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 LRRC23Q53EV4 343 aaPredicted RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 C2CD6Q53TS8 623 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 C4orf22Q6V702 233 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TMC7Q7Z402 723 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 DDX53Q86TM3 631 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PDSS2Q86YH6 399 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PASD1Q8IV76 773 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CXorf38Q8TB03 319 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 FAM172AQ8WUF8 416 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 LZICQ8WZA0 190 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 EZH1Q92800 747 aaPredicted RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 MRRFQ96E11 262 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 HPDLQ96IR7 371 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 MCEEQ96PE7 176 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PANX3Q96QZ0 392 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 SRPK1Q96SB4 655 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 VN1R3Q9BXE9 311 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 IMPG2Q9BZV3 1241 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 S100A14Q9HCY8 104 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PCMTD2Q9NV79 361 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 KLHL11Q9NVR0 708 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 SLC7A8Q9UHI5 535 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 SOX13Q9UN79 622 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TIMM13Q9Y5L4 95 aaPredicted RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 SF3B1O75533 1304 aaKnown RBP eCLIP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 FAM237BA0A1B0GVD1 139 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 GOLGA8SH3BPF8 625 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 GOLGA8MH3BSY2 632 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TMEM189-UBE2V1I3L0A0 370 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ATP9BO43861 1147 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CREB3O43889 395 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CCNT2O60583 730 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CST8O60676 142 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 SNNO75324 88 aaPredicted RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TMEM63AO94886 807 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CFHP08603 1231 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PYGBP11216 843 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 IGFBP4P22692 258 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 KDELR1P24390 212 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PRKCHP24723 683 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CNTFP26441 200 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ELK3P41970 407 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ERVFC1P60507 584 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 OGDHQ02218 1023 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 SLC25A11Q02978 314 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TEX44Q53QW1 395 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 C1orf146Q5VVC0 180 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TIFABQ6ZNK6 161 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 CCNJLQ8IV13 435 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 DEFB123Q8N688 67 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 FAM81AQ8TBF8 368 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PRR11Q96HE9 360 aaPredicted RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ZNF560Q96MR9 790 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 BTBD9Q96Q07 612 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 EPAS1Q99814 870 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 TCF25Q9BQ70 676 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ENTPD7Q9NQZ7 604 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 ATXN10Q9UBB4 475 aa11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 PPARGC1AQ9UBK2 798 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-201ENST00000372003 KPNA7A9QM74 516 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 MCF2LO15068 1137 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 BANF1O75531 89 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 CXCL14O95715 111 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 SOD2P04179 222 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 ENO1P06733 434 aaKnown RBP11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 UQCRBP14927 111 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 TCF4P15884 667 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 TKTP29401 623 aaKnown RBP11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 IRS1P35568 1242 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 PNPLA4P41247 253 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 MAGEA6P43360 314 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms