RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SLC25A11Q02978 314 aaKnown RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 ZNF234Q14588 700 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MESDQ14696 234 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 STARD3Q14849 445 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 KCNT1Q5JUK3 1230 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 CYP4V2Q6ZWL3 525 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 SETD3Q86TU7 594 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 PSTKQ8IV42 348 aaKnown RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MAML2Q8IZL2 1156 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 LMLNQ96KR4 655 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 ACOX2Q99424 681 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MAGEB5Q9BZ81 275 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 CATSPERBQ9H7T0 1116 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 THAP10Q9P2Z0 257 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 INTS6Q9UL03 887 aaKnown RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 HCN2Q9UL51 889 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 PLA2G4CQ9UP65 541 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 NEU3Q9UQ49 428 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 TBC1D30Q9Y2I9 924 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 STON1Q9Y6Q2 735 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 CACNA1IQ9P0X4 2223 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MYO18AQ92614 2054 aaKnown RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 TCRBV21S2A2A0A5A6 115 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 FGF10O15520 208 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 DAPK3O43293 454 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 NRDCO43847 1150 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 APBB3O95704 486 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 IL1R2P27930 398 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MZF1P28698 734 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 ARHGAP25P42331 645 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 IL12RB1P42701 662 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MAPKAPK2P49137 400 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 DGKEP52429 567 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 KRT83P78385 493 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 SULT2A1Q06520 285 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 TCF15Q12870 199 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 SEMA3BQ13214 749 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 CRY1Q16526 586 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 CA9Q16790 459 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 ZFYVE27Q5T4F4 411 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 HEATR6Q6AI08 1181 aaKnown RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 APCDD1Q8J025 514 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 TXLNBQ8N3L3 684 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 KCTD15Q96SI1 283 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 DESI2Q9BSY9 194 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 C2orf49Q9BVC5 232 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 IRF2BPLQ9H1B7 796 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 POLMQ9NP87 494 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 TMEM248Q9NWD8 314 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 BCCIPQ9P287 314 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 DNAI1Q9UI46 699 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 SLC25A13Q9UJS0 675 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 TFR2Q9UP52 801 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 RAD54BQ9Y620 910 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 CKAP5Q14008 2032 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 H3BRJ5 948 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 K7ESF4 209 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 SYNCRIPO60506 623 aaKnown RBP15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ALDH1A2O94788 518 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 SP9P0CG40 484 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 PRKCHP24723 683 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 HOXC13P31276 330 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ARL4AP40617 200 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 VAV2P52735 878 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ZNF135P52742 658 aaPredicted RBP15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ECT2LQ008S8 904 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 KRT81Q14533 505 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ZNF528Q3MIS6 628 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 BOLA3Q53S33 107 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ANO7Q6IWH7 933 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ZC3H14Q6PJT7 736 aaKnown RBP15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ZNF783Q6ZMS7 281 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 NLRP14Q86W24 1093 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 CPNE8Q86YQ8 564 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 CAMKK1Q8N5S9 505 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 RTL3Q8N8U3 475 aaKnown RBP15.23■□□□□ 0.03
COL9A1-204ENST00000370496 DCAF4L2Q8NA75 395 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 OR52K2Q8NGK3 314 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 TEKT4Q8WW24 435 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 TTC17Q96AE7 1141 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ERLEC1Q96DZ1 483 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 GABRG3Q99928 467 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 FEM1AQ9BSK4 669 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 RETREG1Q9H6L5 497 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ATP13A1Q9HD20 1204 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 ZNF212Q9UDV6 495 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 RAPGEFL1Q9UHV5 662 aa15.23■□□□□ 0.03
COL9A1-204ENST00000370496 MUC6Q6W4X9 2439 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 A0A0A6YYK5 440 aaPredicted RBP15.22■□□□□ 0.03
COL9A1-204ENST00000370496 ILVBLA1L0T0 632 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 ZBTB24O43167 697 aaPredicted RBP15.22■□□□□ 0.03
COL9A1-204ENST00000370496 SPOPO43791 374 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 RAMP2O60895 175 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 EPHX1P07099 455 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 KRT7P08729 469 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 RARAP10276 462 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 HLA-EP13747 358 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 GOT1P17174 413 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 ETFBP38117 255 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 CTSOP43234 321 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms