RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ANKS3Q6ZW76 656 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 TMEM86AQ8N2M4 240 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 SLC44A3Q8N4M1 653 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 MRPL45Q9BRJ2 306 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 KIAA1586Q9HCI6 787 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 IL20Q9NYY1 176 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 KLK14Q9P0G3 267 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 HBS1LQ9Y450 684 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 POLR2FP61218 127 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 MGAT5Q09328 741 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 FOXD4Q12950 439 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 MAN2A1Q16706 1144 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF568Q3ZCX4 644 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 C4orf50Q6ZRC1 276 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 RGS9BPQ6ZS82 235 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 STXBP4Q6ZWJ1 553 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 CYP4V2Q6ZWL3 525 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ARCQ7LC44 396 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ZBTB8OSQ8IWT0 167 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 SLC4A11Q8NBS3 891 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 FAM161BQ96MY7 647 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 PRMT1Q99873 361 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 LSM14BQ9BX40 385 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 CCDC68Q9H2F9 335 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 USP29Q9HBJ7 922 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ARMCX3Q9UH62 379 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 TFR2Q9UP52 801 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 SIK3Q9Y2K2 1263 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 CXorf51AA0A1B0GTR3 108 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 CHURC1-FNTBB4DL54 471 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF263O14978 683 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 PER2O15055 1255 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 NDUFB5O43674 189 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ENPP1P22413 925 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ARFIP2P53365 341 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 TUBA1BP68363 451 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 DHX9Q08211 1270 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 SIGLEC14Q08ET2 396 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 VWA3BQ502W6 1294 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 C2orf27AQ580R0 203 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 KLHDC7AQ5VTJ3 777 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 TRIM67Q6ZTA4 783 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 TUBA1AQ71U36 451 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ST13P4Q8IZP2 240 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 KCTD13Q8WZ19 329 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 KREMEN1Q96MU8 473 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 PSMB7Q99436 277 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ELAC2Q9BQ52 826 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 GANQ9H2C0 597 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 DENND2DQ9H6A0 471 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 PARVBQ9HBI1 364 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 SAR1AQ9NR31 198 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ATAD3AQ9NVI7 634 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 HCFC1R1Q9NWW0 138 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 DPP3Q9NY33 737 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 GDE1Q9NZC3 331 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 WNT16Q9UBV4 365 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 AKAP9Q99996 3911 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 K7ENM7 598 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 FBP2O00757 339 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 KMOO15229 486 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 IDH3BO43837 385 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 EXOC3O60645 756 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ADAM23O75077 832 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ATP2C2O75185 946 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 DKK1O94907 266 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 LDHAP00338 332 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 IGLV3-19P01714 112 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 SHBGP04278 402 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 UBL4AP11441 157 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 COL6A2P12110 1019 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 MYCLP1P12525 358 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 CTNNA1P35221 906 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 GRIA2P42262 883 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 LRRC63Q05C16 580 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 PAN2Q504Q3 1202 aaKnown RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 CGB2Q6NT52 195 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ALLCQ8N6M5 410 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 ZBTB44Q8NCP5 570 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 LRRC8CQ8TDW0 803 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 SNF8Q96H20 258 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 MPP4Q96JB8 637 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 UHRF1Q96T88 793 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 SMOQ99835 787 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 PCIF1Q9H4Z3 704 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 EURLQ9NYK6 297 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 UBAP1Q9NZ09 502 aa7.07□□□□□ -1.28
CSDE1-204ENST00000369530 RABL2AQ9UBK7 228 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 GPC6Q9Y625 555 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-204ENST00000369530 FAM47E-STBD1D6RA91 191 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CALUO43852 315 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 RFPL2O75678 378 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CISD3P0C7P0 127 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 T-ENOLP0DO92 83 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 PYGMP11217 842 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 NAT2P11245 290 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CEBPBP17676 345 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 RPL17P18621 184 aaKnown RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 ELAVL2Q12926 359 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms