RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 TMEM216Q9P0N5 145 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 IFT52Q9Y366 437 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 GOLGA8QA0A0J9YX86 632 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 GOLGA8OA6NCC3 632 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 GOLGA8NF8WBI6 632 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 DDX39AO00148 427 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 TNNI1P19237 187 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 CCT8P50990 548 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 HK2P52789 917 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 TRAP1Q12931 704 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 DMP1Q13316 513 aaPredicted RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF618Q5T7W0 954 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 FAM102BQ5T8I3 360 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 ARID2Q68CP9 1835 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 CHSY3Q70JA7 882 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 MCF2L2Q86YR7 1114 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 FAM156AQ8NDB6 213 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 FNIP1Q8TF40 1166 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 STON2Q8WXE9 905 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 PBXIP1Q96AQ6 731 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 TMA16Q96EY4 203 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 NOL11Q9H8H0 719 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 ADA2Q9NZK5 511 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 FER1L6Q2WGJ9 1857 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 TCRBV3S1A0A5B6 114 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF839A8K0R7 811 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 H2AFYO75367 372 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 RSL1D1O76021 490 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 BMP2P12643 396 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 UBXN2AP68543 259 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 NME3Q13232 169 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 PPIL2Q13356 520 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF846Q147U1 533 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 SMUG1Q53HV7 270 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 LMBRD2Q68DH5 695 aaPredicted RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 HMBOX1Q6NT76 420 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 TMCO5AQ8N6Q1 288 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 SLCO4A1Q96BD0 722 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 GMCL1Q96IK5 515 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 CALN1Q9BXU9 219 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 ZBTB26Q9HCK0 441 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 SMOXQ9NWM0 555 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 RBAKQ9NYW8 714 aaPredicted RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 DKK3Q9UBP4 350 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 CNOT6Q9ULM6 557 aaKnown RBP18.29■□□□□ 0.52
CHTOP-201ENST00000368686 SPO11Q9Y5K1 396 aa18.29■□□□□ 0.52
CHTOP-201ENST00000368686 SOCS2O14508 198 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 KCNN4O15554 427 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 PAPSS1O43252 624 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 LYPLA2O95372 231 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 RFC1P35251 1148 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 NPTX2P47972 431 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF132P52740 706 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 GTF2IP78347 998 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 NPNTQ6UXI9 565 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 CDKL2Q92772 493 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 TCF12Q99081 682 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 ADI1Q9BV57 179 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 SACM1LQ9NTJ5 587 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 PCDHGC3Q9UN70 934 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 EIF3FO00303 357 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 HDAC3O15379 428 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 VNN1O95497 513 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 GNAO1P09471 354 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 YWHABP31946 246 aaKnown RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 TCF7P36402 384 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 QARSP47897 775 aaKnown RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 TFDP2Q14188 446 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 KCTD8Q6ZWB6 473 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 PTAR1Q7Z6K3 402 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 PPWD1Q96BP3 646 aaKnown RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 KIFC3Q9BVG8 833 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 ILKAPQ9H0C8 392 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 WDR55Q9H6Y2 383 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-201ENST00000368686 NANOGQ9H9S0 305 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 HACD3Q9P035 362 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 ARHGAP28Q9P2N2 729 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 ANKMY1Q9P2S6 941 aa18.28■□□□□ 0.52
CHTOP-201ENST00000368686 KPNA7A9QM74 516 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 AMHP03971 560 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 CKMT2P17540 419 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 CA8P35219 290 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 RCVRNP35243 200 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 PRKCQQ04759 706 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 NAB1Q13506 487 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 INTS11Q5TA45 600 aaKnown RBP18.27■□□□□ 0.52
CHTOP-201ENST00000368686 CYP4A22Q5TCH4 519 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 SEL1L3Q68CR1 1132 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 GADL1Q6ZQY3 521 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 IFNLR1Q8IU57 520 aaPredicted RBP18.27■□□□□ 0.52
CHTOP-201ENST00000368686 CAMK1DQ8IU85 385 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 GMCL1P1Q8NEA9 526 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 SMARCAD1Q9H4L7 1026 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 SIAEQ9HAT2 523 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 KMT5AQ9NQR1 393 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 PCDHAC2Q9Y5I4 1007 aa18.27■□□□□ 0.52
CHTOP-201ENST00000368686 NRAPQ86VF7 1730 aa18.27■□□□□ 0.51
CHTOP-201ENST00000368686 TESPA1A2RU30 521 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms