RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 NELFAQ9H3P2 528 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 MROH8Q9H579 483 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 WASH6PQ9NQA3 447 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 ITM2CQ9NQX7 267 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 AASSQ9UDR5 926 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 MOSPD1Q9UJG1 213 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 POLHQ9Y253 713 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 CAB39Q9Y376 341 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 FAM186AA6NE01 2351 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 ACACBO00763 2458 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 TRIOO75962 3097 aa5.37□□□□□ -1.55
ECHDC1-204ENST00000368292 PTPRFP10586 1907 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CACNA1HO95180 2353 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TRANK1O15050 2925 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 DMXL1Q9Y485 3027 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 A0A087X0M5 115 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CYP2D7A0A087X1C5 515 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 A0A1B0GX30 115 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TRIM43BA6NCK2 446 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 LRRC72A6NJI9 287 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 F5H0A9 414 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 SGK1O00141 431 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TNPO2O14787 897 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 PRAMEF4O60810 478 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ZNF254O75437 659 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 YEATS4O95619 227 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 RHOXF2BP0C7M4 288 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 PCP11498 1178 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ZNF24P17028 368 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ATP5OP48047 213 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 HK3P52790 923 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 NLRP5P59047 1200 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 GBE1Q04446 702 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 RELQ04864 619 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 DEUP1Q05D60 604 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TARDBPQ13148 414 aaKnown RBP eCLIP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 BLMHQ13867 455 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 KCNB1Q14721 858 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 PROSER3Q2NL68 480 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 MST1LQ2TV78 715 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ZNF362Q5T0B9 420 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 RNF220Q5VTB9 566 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ZNF585AQ6P3V2 769 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 DARS2Q6PI48 645 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 KIF6Q6ZMV9 814 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TTC7BQ86TV6 843 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TMTC1Q8IUR5 882 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 RHOT1Q8IXI2 618 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CERS5Q8N5B7 392 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 LINC00469Q8N7U9 141 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 GBP7Q8N8V2 638 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ANKRD52Q8NB46 1076 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CHST13Q8NET6 341 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 IL17RDQ8NFM7 739 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CTCFLQ8NI51 663 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 FAM76AQ8TAV0 307 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 NOC3LQ8WTT2 800 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TRIB2Q92519 343 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TRIM43Q96BQ3 446 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 PRMT6Q96LA8 375 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 MRGPRX4Q96LA9 322 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 RIPOR3Q96MK2 946 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CCDC43Q96MW1 224 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TIGD1Q96MW7 591 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 PPP1R9BQ96SB3 815 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 SIN3AQ96ST3 1273 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 RHOXF2Q9BQY4 288 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 KLC2Q9H0B6 622 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CLSTN2Q9H4D0 955 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 SEPT11Q9NVA2 429 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ING3Q9NXR8 418 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CWC15Q9P013 229 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 SPATA7Q9P0W8 599 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 CDC23Q9UJX2 597 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 GRID1Q9ULK0 1009 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ATP11BQ9Y2G3 1177 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ZNF711Q9Y462 761 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 PCDHGB5Q9Y5G0 923 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 SNX8Q9Y5X2 465 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 MYO3BQ8WXR4 1341 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 ATRNL1Q5VV63 1379 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 RIF1Q5UIP0 2472 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 USP24Q9UPU5 2620 aa5.36□□□□□ -1.55
ECHDC1-204ENST00000368292 TECTAO75443 2155 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 SPEF2Q9C093 1822 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 SH3TC1Q8TE82 1336 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 A0A088AWK7 358 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 GPR75-ASB3A0A0A6YYF3 556 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 CAPN8A6NHC0 703 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 TXNL1O43396 289 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 CEP104O60308 925 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 SRGAP2O75044 1071 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 EPN2O95208 641 aa5.35□□□□□ -1.55
ECHDC1-204ENST00000368292 JUNP05412 331 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms