RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TBC1D23Q9NUY8 699 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 CRLS1Q9UJA2 301 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 NUDT5Q9UKK9 219 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 PLLPQ9Y342 182 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 PRR5-ARHGAP8B1AHC4 643 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 MGRN1O60291 552 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 COX4I1P13073 169 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 FOXN2P32314 431 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 GRM5P41594 1212 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 GDF10P55107 478 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 OXCT1P55809 520 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 ARHGAP8P85298 464 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 GBE1Q04446 702 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 ADRM1Q16186 407 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 THEMIS2Q5TEJ8 643 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 CYP2R1Q6VVX0 501 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 GPR141Q7Z602 305 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 CMC1Q7Z7K0 106 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 SLC41A1Q8IVJ1 513 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
COPA-202ENST00000368069 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
COPA-202ENST00000368069 H0YGN5 161 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 ZNF197O14709 1029 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 ERCC2P18074 760 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 DNAJB2P25686 324 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 HOXD10P28358 340 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 MATKP42679 507 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 TBCELQ5QJ74 424 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 TMEM79Q9BSE2 394 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 SNX15Q9NRS6 342 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 NFS1Q9Y697 457 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 SNCAIPQ9Y6H5 919 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 PRRG1O14668 218 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 GSC2O15499 205 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 TBX4P57082 545 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 UGT3A1Q6NUS8 523 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 DRICH1Q6PGQ1 229 aaPredicted RBP11.9□□□□□ -0.5
COPA-202ENST00000368069 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.9□□□□□ -0.51e-8■■■■■ 81.8
COPA-202ENST00000368069 SLC4A11Q8NBS3 891 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 RAET1EQ8TD07 263 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 P2RY11Q96G91 374 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 WDR41Q9HAD4 459 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 UTP6Q9NYH9 597 aaKnown RBP11.9□□□□□ -0.5
COPA-202ENST00000368069 CLDN5O00501 218 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 PAPSS1O43252 624 aaPredicted RBP11.9□□□□□ -0.5
COPA-202ENST00000368069 USP1O94782 785 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 FKBP9O95302 570 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 ASMTLO95671 621 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 CRTAMO95727 393 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 CFHP08603 1231 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 MYL4P12829 197 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 PPIL2Q13356 520 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 NEPROQ6NW34 567 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 FKBP9P1Q75LS8 142 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 RNF217Q8TC41 542 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 PNPOQ9NVS9 261 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 LMCD1Q9NZU5 365 aa11.9□□□□□ -0.5
COPA-202ENST00000368069 H0Y626 953 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 RAMP2O60895 175 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 CYBBP04839 570 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 CDH2P19022 906 aaPredicted RBP11.9□□□□□ -0.51
COPA-202ENST00000368069 BEX3Q00994 111 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 ENPEPQ07075 957 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 NFE2Q16621 373 aaPredicted RBP11.9□□□□□ -0.51
COPA-202ENST00000368069 PCID2Q5JVF3 399 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 PCDH20Q8N6Y1 951 aaKnown RBP11.9□□□□□ -0.51
COPA-202ENST00000368069 SLCO2A1Q92959 643 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 ACE2Q9BYF1 805 aaPredicted RBP11.9□□□□□ -0.51
COPA-202ENST00000368069 MID1IP1Q9NPA3 183 aa11.9□□□□□ -0.51
COPA-202ENST00000368069 MYH10P35580 1976 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 GPR25O00155 361 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 ENDOD1O94919 500 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 GRIA4P48058 902 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 KRT33BQ14525 404 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 AARS2Q5JTZ9 985 aaKnown RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 TAF2Q6P1X5 1199 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 DHFR2Q86XF0 187 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 LRRC52Q8N7C0 313 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 BHLHE22Q8NFJ8 381 aaPredicted RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 ENTPD7Q9NQZ7 604 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 NMRK1Q9NWW6 199 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 ICAM3P32942 547 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 SCNN1BP51168 640 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 ZNF135P52742 658 aaPredicted RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 WDR4P57081 412 aaKnown RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 SYTL3Q4VX76 610 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 MOB2Q70IA6 237 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 DHDDSQ86SQ9 333 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 TMEM86AQ8N2M4 240 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 RIN3Q8TB24 985 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 C18orf25Q96B23 403 aaPredicted RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms