RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 GABRB2P47870 512 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
USF1-201ENST00000368019 GDF10P55107 478 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 WNT7BP56706 349 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 ROR1Q01973 937 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 BTKQ06187 659 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 OVGP1Q12889 678 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 CUL3Q13618 768 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 KBTBD12Q3ZCT8 623 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 MTERF2Q49AM1 385 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 TXNRD3NBQ6F5E7 133 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 CAPN12Q6ZSI9 719 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 ZNF410Q86VK4 478 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 WDTC1Q8N5D0 677 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 SLC22A17Q8WUG5 538 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 UCMAQ8WVF2 138 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 STON2Q8WXE9 905 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 TTC17Q96AE7 1141 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 NLRP4Q96MN2 994 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 NECTIN4Q96NY8 510 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 FDXACB1Q9BRP7 624 aaPredicted RBP11.83□□□□□ -0.52
USF1-201ENST00000368019 NMUR2Q9GZQ4 415 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 ZBP1Q9H171 429 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 POMKQ9H5K3 350 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 NRDE2Q9H7Z3 1164 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 FBXO6Q9NRD1 293 aaPredicted RBP11.83□□□□□ -0.52
USF1-201ENST00000368019 ASNSD1Q9NWL6 643 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 ITGA11Q9UKX5 1188 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 SOX13Q9UN79 622 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 CHMP2BQ9UQN3 213 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 PTPRZ1P23471 2315 aaPredicted RBP11.83□□□□□ -0.52
USF1-201ENST00000368019 WDR87Q6ZQQ6 2873 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 MEIS3P2A8K0S8 358 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 C2CD4DB7Z1M9 353 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 TRIM49D1C9J1S8 452 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 CASQ2O14958 399 aaPredicted RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 GAS2O43903 313 aaKnown RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 PEX1O43933 1283 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 FAM189A1O60320 539 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 RNF8O76064 485 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 TRUB2O95900 331 aaKnown RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 BPGMP07738 259 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 GALTP07902 379 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 CTSAP10619 480 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 PYGBP11216 843 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 TPSB2P20231 275 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 MAGEA3P43357 314 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 ACOT2P49753 483 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 EFNA5P52803 228 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 SESN3P58005 492 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 BST1Q10588 318 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 ASPHQ12797 758 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 PDK2Q15119 407 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 TPSAB1Q15661 275 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 PTPN20Q4JDL3 420 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 HP1BP3Q5SSJ5 553 aaPredicted RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 LMBRD2Q68DH5 695 aaPredicted RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 CES5AQ6NT32 575 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 RIPOR1Q6ZS17 1223 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 DDX53Q86TM3 631 aaKnown RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 RFX6Q8HWS3 928 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 TMEM126BQ8IUX1 230 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 UNC45BQ8IWX7 931 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 ULK2Q8IYT8 1036 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 ST13P4Q8IZP2 240 aaPredicted RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 KREMEN2Q8NCW0 462 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 RBM15BQ8NDT2 890 aaKnown RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 OR5B17Q8NGF7 314 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 BCL7CQ8WUZ0 217 aaPredicted RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 LPPQ93052 612 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 HAUS1Q96CS2 278 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 MCRS1Q96EZ8 462 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 TMEM169Q96HH4 297 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 RIPOR3Q96MK2 946 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 GORASP1Q9BQQ3 440 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 SH2D3AQ9BRG2 576 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 HAPLN2Q9GZV7 340 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 SDCBP2Q9H190 292 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 IFT122Q9HBG6 1241 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 CISHQ9NSE2 258 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 FAM105AQ9NUU6 356 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 TBC1D13Q9NVG8 400 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 THAP1Q9NVV9 213 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 COMMD3-BMI1R4GMX3 469 aa11.82□□□□□ -0.52
USF1-201ENST00000368019 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
USF1-201ENST00000368019 FAM186AA6NE01 2351 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 SMIM31A0A1B0GVY4 71 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 CARNS1A5YM72 827 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 SDR42E2A6NKP2 422 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 FAM159BA6NKW6 160 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 GOLGA8SH3BPF8 625 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 GOLGA8MH3BSY2 632 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 BUD23O43709 281 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms