RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 TMCO5BA8MYB1 307 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 CNTN5O94779 1100 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 RRM1P23921 792 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 NNMTP40261 264 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 DPP6P42658 865 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 TPMTP51580 245 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 ALFQ53S48 1182 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 ZNF571Q7Z3V5 609 aaPredicted RBP24.61■■□□□ 1.53
PFDN2-201ENST00000368010 DEFB119Q8N690 84 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 OR52K2Q8NGK3 314 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 NETO1Q8TDF5 533 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 FAM172AQ8WUF8 416 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 CENPIQ92674 756 aaPredicted RBP24.61■■□□□ 1.53
PFDN2-201ENST00000368010 IQCDQ96DY2 449 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 VCPIP1Q96JH7 1222 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 MCEEQ96PE7 176 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 MTG2Q9H4K7 406 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 THADAQ6YHU6 1953 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 WDR87Q6ZQQ6 2873 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 ITIH6Q6UXX5 1313 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 IGLV3-10A0A075B6K4 115 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.6■■□□□ 1.53
PFDN2-201ENST00000368010 SRGAP2O75044 1071 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 TPM3P06753 285 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 RHOCP08134 193 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 OXTRP30559 389 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 ADRA1BP35368 520 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 NUMBP49757 651 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 HDAC4P56524 1084 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 ZBTB16Q05516 673 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 ZNF33AQ06730 810 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 ARID5BQ14865 1188 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 RAB6CQ53S08 254 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 DCUN1D2Q6PH85 259 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 ALG14Q96F25 216 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 TOE1Q96GM8 510 aaKnown RBP24.6■■□□□ 1.53
PFDN2-201ENST00000368010 RPL10LQ96L21 214 aaKnown RBP24.6■■□□□ 1.53
PFDN2-201ENST00000368010 FEM1AQ9BSK4 669 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 RAB6CQ9H0N0 254 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 MUC3BQ9H195 1237 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 TSPY26PQ9H489 355 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 MPP6Q9NZW5 540 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 SLCO3A1Q9UIG8 710 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 VPS28Q9UK41 221 aa24.6■■□□□ 1.53
PFDN2-201ENST00000368010 TTC34A8MYJ7 566 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 SIN3BO75182 1162 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 IGLV3-19P01714 112 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 DNTTP04053 509 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 C7P10643 843 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 STK19P49842 368 aaPredicted RBP24.59■■□□□ 1.53
PFDN2-201ENST00000368010 ZNF143P52747 638 aaPredicted RBP24.59■■□□□ 1.53
PFDN2-201ENST00000368010 RPS14P62263 151 aaKnown RBP24.59■■□□□ 1.53
PFDN2-201ENST00000368010 PUM1Q14671 1186 aaKnown RBP eCLIP24.59■■□□□ 1.532e-15■■□□□ 12
PFDN2-201ENST00000368010 PPP1R15BQ5SWA1 713 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 C6orf118Q5T5N4 469 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 ZNF776Q68DI1 518 aaPredicted RBP24.59■■□□□ 1.53
PFDN2-201ENST00000368010 TCEAL6Q6IPX3 200 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 SETD3Q86TU7 594 aaPredicted RBP24.59■■□□□ 1.53
PFDN2-201ENST00000368010 SYT12Q8IV01 421 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 TCEAL3Q969E4 200 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 ZYG11BQ9C0D3 744 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 DLL3Q9NYJ7 618 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 WSB2Q9NYS7 404 aaPredicted RBP24.59■■□□□ 1.53
PFDN2-201ENST00000368010 SLC25A13Q9UJS0 675 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 OR51B4Q9Y5P0 310 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 RALGAPA1Q6GYQ0 2036 aa24.59■■□□□ 1.53
PFDN2-201ENST00000368010 EDDM13A0A1B0GTR0 161 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 TARSL2A2RTX5 802 aaKnown RBP24.58■■□□□ 1.53
PFDN2-201ENST00000368010 KHNYNO15037 678 aaKnown RBP24.58■■□□□ 1.53
PFDN2-201ENST00000368010 CCP110O43303 1012 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 SKILP12757 684 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 DESP17661 470 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 RPL7AP62424 266 aaKnown RBP24.58■■□□□ 1.53
PFDN2-201ENST00000368010 TDRD12Q587J7 1177 aaKnown RBP24.58■■□□□ 1.53
PFDN2-201ENST00000368010 LRSAM1Q6UWE0 723 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 TFAP2DQ7Z6R9 452 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 NTAN1Q96AB6 310 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 HSPA12BQ96MM6 686 aa24.58■■□□□ 1.53
PFDN2-201ENST00000368010 RSPH9Q9H1X1 276 aaPredicted RBP24.58■■□□□ 1.53
PFDN2-201ENST00000368010 ATXN2Q99700 1313 aaKnown RBP24.58■■□□□ 1.52
PFDN2-201ENST00000368010 DDX3XO00571 662 aaKnown RBP eCLIP24.57■■□□□ 1.527e-10■■■■□ 26.5
PFDN2-201ENST00000368010 GDF9O60383 454 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 RNASEH1O60930 286 aaKnown RBP24.57■■□□□ 1.52
PFDN2-201ENST00000368010 GZMAP12544 262 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 ITPKAP23677 461 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 OR1E1P30953 314 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 HOXD12P35452 270 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 ZBED6P86452 979 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 NRG1Q02297 640 aaPredicted RBP24.57■■□□□ 1.52
PFDN2-201ENST00000368010 TTC31Q49AM3 519 aaPredicted RBP24.57■■□□□ 1.52
PFDN2-201ENST00000368010 SLC41A1Q8IVJ1 513 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 SYN2Q92777 582 aaPredicted RBP24.57■■□□□ 1.52
PFDN2-201ENST00000368010 FOXJ1Q92949 421 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 ZNF419Q96HQ0 510 aaPredicted RBP24.57■■□□□ 1.52
PFDN2-201ENST00000368010 CNPY3Q9BT09 278 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 GPR174Q9BXC1 333 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 XPO4Q9C0E2 1151 aaKnown RBP24.57■■□□□ 1.52
PFDN2-201ENST00000368010 OSBPL2Q9H1P3 480 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 PARVAQ9NVD7 372 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 PPARGC1AQ9UBK2 798 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms