RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 PIF1Q9H611 641 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 JMJD4Q9H9V9 463 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 TLR8Q9NR97 1041 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 SLC25A12O75746 678 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 HOXC6P09630 235 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 PPIL2Q13356 520 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 HECTD3Q5T447 861 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 PRR23BQ6ZRT6 265 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 RBM43Q6ZSC3 357 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 FAM92BQ6ZTR7 304 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 KCNMB4Q86W47 210 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 CLHC1Q8NHS4 586 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 VPS28Q9UK41 221 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 HBS1LQ9Y450 684 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 BGNP21810 368 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 PRDX5P30044 214 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 ERMARDQ5T6L9 678 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MSANTD1Q6ZTZ1 278 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 CHST13Q8NET6 341 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 GSDMCQ9BYG8 508 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 TRIM2Q9C040 744 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MID1IP1Q9NPA3 183 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 SNX6Q9UNH7 406 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 AP4E1Q9UPM8 1137 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 ZBTB14O43829 449 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 NAMPTP43490 491 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 RGS1Q08116 209 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 SPIDRQ14159 915 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MYBPC3Q14896 1274 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 PHF10Q8WUB8 498 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 OSGEPL1Q9H4B0 414 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 L2HGDHQ9H9P8 463 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 RBM7Q9Y580 266 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 PLOD3O60568 738 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 CCNT2O60583 730 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 CDK16Q00536 496 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 FMR1Q06787 632 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■■■■□ 24.1
TPR-201ENST00000367478 PAPD7Q5XG87 772 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 DENND5AQ6IQ26 1287 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 PSMA8Q8TAA3 256 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 GRPEL2Q8TAA5 225 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MTMR12Q9C0I1 747 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 THAP2Q9H0W7 228 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 NECTIN3Q9NQS3 549 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MRASO14807 208 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 C6orf222P0C671 652 aaPredicted RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 ACAP1Q15027 740 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 FUT8Q9BYC5 575 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 IKZF3Q9UKT9 509 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 CACNA1FO60840 1977 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 OGTO15294 1046 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 RHOCP08134 193 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 CYP2A6P11509 494 aaPredicted RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 DLG4P78352 724 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MARC1Q5VT66 337 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 FRMD6Q96NE9 622 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 R3HDM2Q9Y2K5 976 aaKnown RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 LYVE1Q9Y5Y7 322 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
TPR-201ENST00000367478 ZNF549Q6P9A3 640 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 TBCBQ99426 244 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 CCDC167Q9P0B6 97 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 TAF6LQ9Y6J9 622 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
TPR-201ENST00000367478 SRBD1Q8N5C6 995 aaKnown RBP12.63□□□□□ -0.39
TPR-201ENST00000367478 ATL1Q8WXF7 558 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 MXRA8Q9BRK3 442 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 SPAG4Q9NPE6 437 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 ANGPT4Q9Y264 503 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 GPC6Q9Y625 555 aaPredicted RBP12.63□□□□□ -0.39
TPR-201ENST00000367478 MMP10P09238 476 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 RHOAP61586 193 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 USP46P62068 366 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 CYP2A13Q16696 494 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 PGBD2Q6P3X8 592 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 LENG1Q96BZ8 264 aaPredicted RBP12.63□□□□□ -0.39
TPR-201ENST00000367478 DCLK3Q9C098 648 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 AGPAT3Q9NRZ7 376 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 OPTCQ9UBM4 332 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 USP6P35125 1406 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 PON1P27169 355 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 VAT1Q99536 393 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 PNPLA3Q9NST1 481 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 MLYCDO95822 493 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 RRM1P23921 792 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
TPR-201ENST00000367478 CCR1P32246 355 aa12.63□□□□□ -0.39
TPR-201ENST00000367478 EPHB3P54753 998 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms