RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 FAM58BPP0C7Q3 252 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 DPEP1P16444 411 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TPSB2P20231 275 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 L1CAMP32004 1257 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SERPINB8P50452 374 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 GALK1P51570 392 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SNX16P57768 344 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 GRM1Q13255 1194 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TUBB3Q13509 450 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TPSAB1Q15661 275 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 DBN1Q16643 649 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 GEN1Q17RS7 908 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SLC9A4Q6AI14 798 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 FSTL4Q6MZW2 842 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 ATG14Q6ZNE5 492 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TSHZ1Q6ZSZ6 1077 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TP53INP2Q8IXH6 220 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TBCBQ99426 244 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SLC4A5Q9BY07 1137 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 PRDM12Q9H4Q4 367 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SUDS3Q9H7L9 328 aaPredicted RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 LIN28AQ9H9Z2 209 aaKnown RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 WDR41Q9HAD4 459 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 MOCS1Q9NZB8 636 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 HES2Q9Y543 173 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 ARHGAP10A1A4S6 786 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 GCATO75600 419 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TMCC1O94876 653 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 ATP5BP06576 529 aaKnown RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 C2P06681 752 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 PSMC3P17980 439 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 GRIA4P48058 902 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 MTTPP55157 894 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 MCCD1P59942 119 aaPredicted RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 PTK2BQ14289 1009 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TARBP2Q15633 366 aaKnown RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 LSM12Q3MHD2 195 aaKnown RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 LCLAT1Q6UWP7 414 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 OLFML1Q6UWY5 402 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 LCA5Q86VQ0 697 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
CD46-208ENST00000367042 TTC16Q8NEE8 873 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 ACMSDQ8TDX5 336 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TEPSINQ96N21 525 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 GATA5Q9BWX5 397 aaPredicted RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 DPEP3Q9H4B8 488 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 CYP3A43Q9HB55 503 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 VANGL2Q9ULK5 521 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 CDYLQ9Y232 598 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TPST1O60507 370 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 GPC4O75487 556 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 ARIH2O95376 493 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 MPP3Q13368 585 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 ZNF460Q14592 562 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 DGKDQ16760 1214 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SOWAHAQ2M3V2 549 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 SLC10A6Q3KNW5 377 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 CCDC153Q494R4 210 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 CERCAMQ5T4B2 595 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 URGCPQ8TCY9 931 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 DIS3LQ8TF46 1054 aaKnown RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 APBA2Q99767 749 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 RTKNQ9BST9 563 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 FAM49AQ9H0Q0 323 aaPredicted RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 STN1Q9H668 368 aaKnown RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 CYP4F12Q9HCS2 524 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 PRMT7Q9NVM4 692 aaPredicted RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 STK32BQ9NY57 414 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 UBAP1Q9NZ09 502 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 NDUFA13Q9P0J0 144 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 RUVBL2Q9Y230 463 aaKnown RBP8.36□□□□□ -1.07
CD46-208ENST00000367042 RGSL1A5PLK6 1076 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 H3BSA7 217 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 PPEF2O14830 753 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 DNAJA2O60884 412 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ENDOD1O94919 500 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ASLP04424 464 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 TXNP10599 105 aaKnown RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 MYL4P12829 197 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ME2P23368 584 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 TNFAIP2Q03169 654 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 SEMA5AQ13591 1074 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 ARL13AQ5H913 290 aaPredicted RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 NCBP2-AS2Q69YL0 99 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 UGT2A3Q6UWM9 527 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 C4orf22Q6V702 233 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 CATSPERGQ6ZRH7 1159 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ILDR2Q71H61 639 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ZBTB46Q86UZ6 589 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 KBTBD6Q86V97 674 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 DEFB106AQ8N104 65 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 PDCD6IPQ8WUM4 868 aaKnown RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 RNF34Q969K3 372 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 QKIQ96PU8 341 aaKnown RBP eCLIP8.35□□□□□ -1.074e-11■■■■□ 24.8
CD46-208ENST00000367042 PKP2Q99959 881 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 MED10Q9BTT4 135 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ACE2Q9BYF1 805 aaPredicted RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 PCDHAC1Q9H158 963 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms