RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
NID1-202ENST00000366595 FAM92AA1XBS5 289 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ZNF879B4DU55 563 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 MDM4O15151 490 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 MRPS22P82650 360 aaKnown RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 ZNF844Q08AG5 666 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 TMC7Q7Z402 723 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 HIPK1Q86Z02 1210 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 CAMKK1Q8N5S9 505 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 KAT2BQ92831 832 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 PCDHB7Q9Y5E2 793 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 TTC37Q6PGP7 1564 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ZW10O43264 779 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 CDC40O60508 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
NID1-202ENST00000366595 MBL2P11226 248 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 OMPP47874 163 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 OLR1P78380 273 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 BST2Q10589 180 aaKnown RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 OLFML2AQ68BL7 652 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 MPZL3Q6UWV2 235 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ZNF621Q6ZSS3 439 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 SSR3Q9UNL2 185 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 METP08581 1390 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 LIN7AO14910 233 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 KHDRBS3O75525 346 aaKnown RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 HIST1H2ABP04908 130 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 GLI1P08151 1106 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ENO2P09104 434 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 C6orf222P0C671 652 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 PBLDP30039 288 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 CPT1AP50416 773 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 HERVK_113P62684 666 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 C16orf86Q6ZW13 317 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 HIST3H2AQ7L7L0 130 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 HIST1H2ACQ93077 130 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 KLHL32Q96NJ5 620 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 PARK7Q99497 189 aaKnown RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 CCDC167Q9P0B6 97 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 RRM1P23921 792 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 IDH2P48735 452 aaKnown RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 TRIM28Q13263 835 aaKnown RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 RNF43Q68DV7 783 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 WDR49Q8IV35 697 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ZKSCAN4Q969J2 545 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 ANKZF1Q9H8Y5 726 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 RBM22Q9NW64 420 aaKnown RBP eCLIP17.03■□□□□ 0.32
NID1-202ENST00000366595 IKZF3Q9UKT9 509 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 CORO1CQ9ULV4 474 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 LDOC1O95751 146 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 HSF2Q03933 536 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ERMARDQ5T6L9 678 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 AAGABQ6PD74 315 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 DHDDSQ86SQ9 333 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 OFCC1Q8IZS5 231 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ZFP28Q8NHY6 868 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 MAGEE2Q8TD90 523 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 CAB39LQ9H9S4 337 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 NINJ2Q9NZG7 142 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 ATXN10Q9UBB4 475 aa17.03■□□□□ 0.32
NID1-202ENST00000366595 MTF2Q9Y483 593 aaPredicted RBP17.03■□□□□ 0.32
NID1-202ENST00000366595 RASA1P20936 1047 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 RPL19P84098 196 aaKnown RBP17.02■□□□□ 0.32
NID1-202ENST00000366595 POU5F2Q8N7G0 328 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 BPIFB6Q8NFQ5 453 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 MAGEC3Q8TD91 643 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 AASDHPPTQ9NRN7 309 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 LEF1Q9UJU2 399 aaPredicted RBP17.02■□□□□ 0.32
NID1-202ENST00000366595 R3HDM2Q9Y2K5 976 aaKnown RBP17.02■□□□□ 0.32
NID1-202ENST00000366595 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 PGK1P00558 417 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 TSHRP16473 764 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 SWI5Q1ZZU3 235 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 PACS2Q86VP3 889 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 CARNMT1Q8N4J0 409 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 TRPV1Q8NER1 839 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 OPTCQ9UBM4 332 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 PSME2Q9UL46 239 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 DMTF1Q9Y222 760 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 ANGPT4Q9Y264 503 aa17.02■□□□□ 0.32
NID1-202ENST00000366595 TEX46H3BTG2 121 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 TRIM38O00635 465 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 TNFAIP8L3Q5GJ75 292 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 PERM1Q5SV97 790 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.02■□□□□ 0.31
NID1-202ENST00000366595 KIAA0556O60303 1618 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 TTLL13PA6NNM8 815 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 ARF5P84085 180 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 BHLHB9Q6PI77 547 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 RXFP2Q8WXD0 754 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 VPS35Q96QK1 796 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 SEMA6AQ9H2E6 1030 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 RMI1Q9H9A7 625 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 KCNH7Q9NS40 1196 aa17.02■□□□□ 0.31
NID1-202ENST00000366595 HBS1LQ9Y450 684 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms