RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MAP1BP46821 2468 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 NYNRINQ9P2P1 1898 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 EDDM13A0A1B0GTR0 161 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 LRRC10BA6NIK2 292 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 EPHB6O15197 1021 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 SEMA4FO95754 770 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 IGHV4-34P06331 123 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 MMEP08473 750 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 PDGFRAP16234 1089 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 STK19P49842 368 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 KLK7P49862 253 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 JAM2P57087 298 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 NOMO3P69849 1222 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 CENPCQ03188 943 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 NME3Q13232 169 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 CST6Q15828 149 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 SLC25A52Q3SY17 297 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 TAF3Q5VWG9 929 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 DHX40Q8IX18 779 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 HDDC3Q8N4P3 179 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 FAM131CQ96AQ9 280 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 BIRC7Q96CA5 298 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 FEM1AQ9BSK4 669 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 VPS16Q9H269 839 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 SLC32A1Q9H598 525 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 SYNCQ9H7C4 482 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 FANCLQ9NW38 375 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 VANGL2Q9ULK5 521 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 SIK3Q9Y2K2 1263 aa14.09□□□□□ -0.15
TNFRSF1A-202ENST00000366159 ZZEF1O43149 2961 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 DRGXA6NNA5 263 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 MID1O15344 667 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CLDN11O75508 207 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ENDOD1O94919 500 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 F9P00740 461 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CYP1A1P04798 512 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ZNF883P0CG24 379 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CHRNB2P17787 502 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FLT3P36888 993 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 OXCT1P55809 520 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FAM193AP78312 1265 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SULT2A1Q06520 285 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TTC31Q49AM3 519 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 C2CD6Q53TS8 623 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ERICH1Q86X53 443 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ZNF677Q86XU0 584 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RNF34Q969K3 372 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 C1orf74Q96LT6 269 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TBCBQ99426 244 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TMEM121BQ9BXQ6 578 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TKTL2Q9H0I9 626 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 MIR1-1HGQ9H1L0 117 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 HSD3B7Q9H2F3 369 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 WDCPQ9H6R7 721 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 IL21RQ9HBE5 538 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TMEM51Q9NW97 253 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 LIMA1Q9UHB6 759 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 STAP1Q9ULZ2 295 aa14.08□□□□□ -0.16
TNFRSF1A-202ENST00000366159 IGLV3-10A0A075B6K4 115 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PES1O00541 588 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ATP9BO43861 1147 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RNASEH1O60930 286 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CBFA2T3O75081 653 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CNTN5O94779 1100 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 VAV1P15498 845 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ZNF18P17022 549 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CD27P26842 260 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SLC8A1P32418 973 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GGCXP38435 758 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CSNK1EP49674 416 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GALCP54803 685 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CDH4P55283 916 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RNASE9P60153 205 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FMO1Q01740 532 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NCAPHQ15003 741 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ALFQ53S48 1182 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 APTXQ7Z2E3 356 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 MMAAQ8IVH4 418 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 AADATQ8N5Z0 425 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SLC20A1Q8WUM9 679 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CPA5Q8WXQ8 436 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GBP4Q96PP9 640 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NEUROG2Q9H2A3 272 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PDCL3Q9H2J4 239 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 EBF2Q9HAK2 575 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TM9SF3Q9HD45 589 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FBXL12Q9NXK8 326 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ZNF212Q9UDV6 495 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FZD4Q9ULV1 537 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 DAAM1Q9Y4D1 1078 aa14.07□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SPAARA0A1B0GVQ0 90 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 A0A1W2PP55 124 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SH3BP5O60239 455 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GFPT2O94808 682 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 MMP8P22894 467 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 DRD3P35462 400 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms