RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PPP2R2AP63151 447 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 WASHC5Q12768 1159 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ZBTB17Q13105 803 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 IKBKEQ14164 716 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 MPP2Q14168 576 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 MAPRE1Q15691 268 aaKnown RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 PSMD5Q16401 504 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 CCDC92Q53HC0 331 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ANKRD20A2Q5SQ80 823 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 C10orf120Q5SQS8 335 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ANKRD20A1Q5TYW2 823 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ANKRD20A3Q5VUR7 823 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 KIAA1841Q6NSI8 718 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 SLC30A9Q6PML9 568 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 KDM7AQ6ZMT4 941 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ARHGEF18Q6ZSZ5 1173 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 SPRED2Q7Z698 418 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 EXOC3L1Q86VI1 746 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 CAND1Q86VP6 1230 aaKnown RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 HOOK3Q86VS8 718 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 CDKL3Q8IVW4 592 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 DCP1BQ8IZD4 617 aaKnown RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ZNF567Q8N184 647 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 C4orf33Q8N1A6 199 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 COLGALT1Q8NBJ5 622 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 BBOF1Q8ND07 529 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 GDAP1Q8TB36 358 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 HTR3CQ8WXA8 447 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ARHGEF2Q92974 986 aaKnown RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 FCRL2Q96LA5 508 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 SERPINB12Q96P63 405 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 OLFM3Q96PB7 478 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 TTPALQ9BTX7 342 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 MMADHCQ9H3L0 296 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 CWH43Q9H720 699 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 UGT1A7Q9HAW7 530 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 UGT1A10Q9HAW8 530 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 UGT1A8Q9HAW9 530 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 KCNK9Q9NPC2 374 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 VANGL2Q9ULK5 521 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 ZMYND8Q9ULU4 1186 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-202ENST00000359366 SHOC2Q9UQ13 582 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 MAD1L1Q9Y6D9 718 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 GREB1Q4ZG55 1949 aa5.22□□□□□ -1.57
ATXN3-202ENST00000359366 A0A1W2PPM1 405 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 ZBBXA8MT70 800 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 TMEM189-UBE2V1I3L0A0 370 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 LIN7AO14910 233 aaPredicted RBP5.21□□□□□ -1.57
ATXN3-202ENST00000359366 ALOX15BO15296 676 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 IRAK2O43187 625 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 SH3BP5O60239 455 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 CNTN5O94779 1100 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 CXCL10P02778 98 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 PYGLP06737 847 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 CLTBP09497 229 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 CHN1P15882 459 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 SLC8A1P32418 973 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 LSP1P33241 339 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 MDH1P40925 334 aaKnown RBP5.21□□□□□ -1.57
ATXN3-202ENST00000359366 KCNQ1P51787 676 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 EIF3BP55884 814 aaKnown RBP5.21□□□□□ -1.57
ATXN3-202ENST00000359366 SEMA3BQ13214 749 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 MRPL58Q14197 206 aaKnown RBP5.21□□□□□ -1.57
ATXN3-202ENST00000359366 PKN2Q16513 984 aaKnown RBP5.21□□□□□ -1.57
ATXN3-202ENST00000359366 PIK3R6Q5UE93 754 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 CASC4Q6P4E1 433 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 TRMT10BQ6PF06 316 aaKnown RBP5.21□□□□□ -1.57
ATXN3-202ENST00000359366 ZNF534Q76KX8 674 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 PALM2Q8IXS6 379 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 LRRC43Q8N309 656 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 CCHCR1Q8TD31 782 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 PPP1R14BQ96C90 147 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 DHRS1Q96LJ7 313 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 ELAC1Q9H777 363 aaKnown RBP5.21□□□□□ -1.57
ATXN3-202ENST00000359366 PLAC1Q9HBJ0 212 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 ABCC13Q9NSE7 274 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 SLC12A6Q9UHW9 1150 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 HS3ST4Q9Y661 456 aa5.21□□□□□ -1.57
ATXN3-202ENST00000359366 CXorf49A8MYA2 514 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-202ENST00000359366 SYN3O14994 580 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 ZBTB24O43167 697 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-202ENST00000359366 GJB3O75712 270 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 JCHAINP01591 159 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 CCDC159P0C7I6 412 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 MSL3P1P0C860 447 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 IRF1P10914 325 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 COL6A1P12109 1028 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 RAG1P15918 1043 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 TPH1P17752 444 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 YWHAQP27348 245 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 GMPRP36959 345 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 TUBP50607 506 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 NFE2Q16621 373 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-202ENST00000359366 ARL13BQ3SXY8 428 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 ALFQ53S48 1182 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 ARTNQ5T4W7 220 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 C6orf118Q5T5N4 469 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 AGBL2Q5U5Z8 902 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 RAP1GAP2Q684P5 730 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 RFWD3Q6PCD5 774 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms