RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 DZANK1Q9NVP4 752 aa14.23□□□□□ -0.13
PDLIM5-203ENST00000359265 PAK5Q9P286 719 aa14.23□□□□□ -0.13
PDLIM5-203ENST00000359265 FAM153AQ9UHL3 310 aa14.23□□□□□ -0.13
PDLIM5-203ENST00000359265 ANAPC5Q9UJX4 755 aa14.23□□□□□ -0.13
PDLIM5-203ENST00000359265 TPX2Q9ULW0 747 aaKnown RBP14.23□□□□□ -0.13
PDLIM5-203ENST00000359265 CHD5Q8TDI0 1954 aa14.23□□□□□ -0.13
PDLIM5-203ENST00000359265 DOCK6Q96HP0 2047 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 MYO7AQ13402 2215 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 C2orf78A6NCI8 922 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 WASH4PA8MWX3 477 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 F5H5T6 163 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 MTSS1O43312 755 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 ACSL4O60488 711 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 STC2O76061 302 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 OLFM2O95897 454 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 MYL4P12829 197 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 RHOQP17081 205 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 TACR2P21452 398 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 RPL22P35268 128 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 HSPA9P38646 679 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 GALNT2Q10471 571 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 RAP1GAP2Q684P5 730 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 RHBDF2Q6PJF5 856 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 BMP8AQ7Z5Y6 402 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 C14orf80Q86SX3 495 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 HS6ST3Q8IZP7 471 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 HTR3CQ8WXA8 447 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 AZIN2Q96A70 460 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 HDAC11Q96DB2 347 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 GDAP1L1Q96MZ0 367 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 DDX50Q9BQ39 737 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 CORO1BQ9BR76 489 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 LRRC3Q9BY71 257 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 FOXP3Q9BZS1 431 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 ZYG11BQ9C0D3 744 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 VANGL2Q9ULK5 521 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 SHOC2Q9UQ13 582 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 MYO18AQ92614 2054 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 NOTCH4Q99466 2003 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 C2orf16Q68DN1 1984 aa14.22□□□□□ -0.13
PDLIM5-203ENST00000359265 IGLV3-10A0A075B6K4 115 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 SMAPO00193 183 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 LATS1O95835 1130 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 VAV1P15498 845 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 PTPN2P17706 415 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 CORO1AP31146 461 aaKnown RBP14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 ID4P47928 161 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 EPHA5P54756 1037 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 CYP4F8P98187 520 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 PPIDQ08752 370 aaKnown RBP14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 AP1B1Q10567 949 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 MORF4L2Q15014 288 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 HIBCHQ6NVY1 386 aaPredicted RBP14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 GAREM2Q75VX8 874 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 B4GALNT4Q76KP1 1039 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 PPIL6Q8IXY8 311 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 ZNF683Q8IZ20 524 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 CCDC33Q8N5R6 958 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 CCNYQ8ND76 341 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 RPRD1AQ96P16 312 aaPredicted RBP14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 PRMT1Q99873 361 aaKnown RBP14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 PRKD2Q9BZL6 878 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 RNF38Q9H0F5 515 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 ATXN3LQ9H3M9 355 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 SFXN1Q9H9B4 322 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 VIPAS39Q9H9C1 493 aa14.21□□□□□ -0.13
PDLIM5-203ENST00000359265 TRAV19A0A0A6YYK7 116 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 MED19A0JLT2 244 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 C5orf60A6NFR6 353 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 MAP2K7O14733 419 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 PPFIA2O75334 1257 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 GCATO75600 419 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 RFPL2O75678 378 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 IRF1P10914 325 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 HDCP19113 662 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 DDX6P26196 483 aaKnown RBP eCLIP14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 GARSP41250 739 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 BASP1P80723 227 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 ZNF33AQ06730 810 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 SLMAPQ14BN4 828 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 ARHGAP15Q53QZ3 475 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 RABGAP1LQ5R372 815 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 ARTNQ5T4W7 220 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 RNASEH2BQ5TBB1 312 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 TXNDC8Q6A555 127 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 NADSYN1Q6IA69 706 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 FBXL22Q6P050 247 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 TMC3Q7Z5M5 1100 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 HOOK3Q86VS8 718 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 NLRP14Q86W24 1093 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 DENND1CQ8IV53 801 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 ADHFE1Q8IWW8 467 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 LGI2Q8N0V4 545 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 ATPAF2Q8N5M1 289 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 ARL14EPQ8N8R7 260 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 EDAQ92838 391 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 PBXIP1Q96AQ6 731 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 LGMNQ99538 433 aa14.2□□□□□ -0.14
PDLIM5-203ENST00000359265 KLC2Q9H0B6 622 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms