RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 BFARQ9NZS9 450 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 VTI1BQ9UEU0 232 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 RAP2CQ9Y3L5 183 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 DNAJC25-GNG10A0A024R161 153 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 LOC100653049A0A140TA62 436 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 AP3B1O00203 1094 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 IRF6O14896 467 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 KRT34O76011 436 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 ERVK-10P10266 1014 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 GRAMD1BQ3KR37 738 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 TDRD5Q8NAT2 981 aaKnown RBP18.09■□□□□ 0.49
RTN4-204ENST00000357732 ADCY4Q8NFM4 1077 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 RNF139Q8WU17 664 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 OPTNQ96CV9 577 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 DGCR14Q96DF8 476 aaKnown RBP18.09■□□□□ 0.49
RTN4-204ENST00000357732 BRD8Q9H0E9 1235 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 AKT3Q9Y243 479 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 C15orf38-AP3S2A0A0A6YYH1 394 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 MATN2O00339 956 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 HDAC3O15379 428 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 NCAM2O15394 837 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 AP2A1O95782 977 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 TXNP10599 105 aaKnown RBP18.09■□□□□ 0.49
RTN4-204ENST00000357732 DNAJB2P25686 324 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 BAG6P46379 1132 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 RPL5P46777 297 aaKnown RBP18.09■□□□□ 0.49
RTN4-204ENST00000357732 ATXN1P54253 815 aaKnown RBP18.09■□□□□ 0.49
RTN4-204ENST00000357732 FSTL4Q6MZW2 842 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 ARPINQ7Z6K5 226 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 STRA8Q7Z7C7 330 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 ZNF567Q8N184 647 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 BEST2Q8NFU1 509 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 NDNQ99608 321 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 NMRAL1Q9HBL8 299 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 TXNRD2Q9NNW7 524 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 PDGFCQ9NRA1 345 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 OXSMQ9NWU1 459 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 INPP5FQ9Y2H2 1132 aa18.09■□□□□ 0.49
RTN4-204ENST00000357732 BRCA1P38398 1863 aaKnown RBP18.08■□□□□ 0.49
RTN4-204ENST00000357732 TRIP11Q15643 1979 aa18.08■□□□□ 0.49
RTN4-204ENST00000357732 A0A096LPK6 155 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 MTSS1O43312 755 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 DAB1O75553 588 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 FBXO21O94952 628 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 LAMB3Q13751 1172 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 RFTN1Q14699 578 aaPredicted RBP18.08■□□□□ 0.48
RTN4-204ENST00000357732 ZBTB6Q15916 424 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 SLC9B1Q4ZJI4 515 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 BNC2Q6ZN30 1099 aaPredicted RBP18.08■□□□□ 0.48
RTN4-204ENST00000357732 TMC7Q7Z402 723 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 BNIPLQ7Z465 357 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 ARHGAP22Q7Z5H3 698 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 ZNF410Q86VK4 478 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 OR6B3Q8NGW1 331 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 LENG8Q96PV6 779 aaPredicted RBP18.08■□□□□ 0.48
RTN4-204ENST00000357732 DRC3Q9H069 523 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 PTTG2Q9NZH5 202 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 GOLGA8QA0A0J9YX86 632 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 GOLGA8OA6NCC3 632 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 GOLGA8NF8WBI6 632 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 PENKP01210 267 aaPredicted RBP18.08■□□□□ 0.48
RTN4-204ENST00000357732 CAPNS1P04632 268 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 PIK3R1P27986 724 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 MLH1P40692 756 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 R3HDM1Q15032 1099 aaKnown RBP18.08■□□□□ 0.48
RTN4-204ENST00000357732 AHI1Q8N157 1196 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 URGCPQ8TCY9 931 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 NT5C3BQ969T7 300 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 DCUN1D1Q96GG9 259 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 CASS4Q9NQ75 786 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 VANGL2Q9ULK5 521 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 NME7Q9Y5B8 376 aa18.08■□□□□ 0.48
RTN4-204ENST00000357732 UNCXA6NJT0 531 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 E9PBE3 544 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 ADCY6O43306 1168 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 KLHL41O60662 606 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 TADA2AO75478 443 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 CREB5Q02930 508 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 USP4Q13107 963 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 Q3C1V9 767 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 SEL1L3Q68CR1 1132 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 PGAM4Q8N0Y7 254 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 CLEC4CQ8WTT0 213 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 LRGUKQ96M69 825 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 SLC9A7Q96T83 725 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 MCMBPQ9BTE3 642 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 IL22Q9GZX6 179 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 PRDM12Q9H4Q4 367 aa18.07■□□□□ 0.48
RTN4-204ENST00000357732 CNOT11Q9UKZ1 510 aaKnown RBP18.07■□□□□ 0.48
RTN4-204ENST00000357732 ZCWPW2A0A1B0GU75 182 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 BTBD19C9JJ37 291 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 STRNO43815 780 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 CABYRO75952 493 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 SORBS2O94875 1100 aaKnown RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 TNFAIP8O95379 198 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 PPARGP37231 505 aaPredicted RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 GRIA2P42262 883 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 NPY2RP49146 381 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 SULT1E1P49888 294 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms