RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 OPLAHO14841 1288 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 SNX3O60493 162 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ATP9AO75110 1047 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PDE5AO76074 875 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 OR56A5P0C7T3 313 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 NUMBP49757 651 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CDC16Q13042 620 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 XRCC4Q13426 336 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PLPPR4Q7Z2D5 763 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 TMEM161BQ8NDZ6 487 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 RMND5BQ96G75 393 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ATP13A1Q9HD20 1204 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 C15orf41Q9Y2V0 281 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ANKRD63C9JTQ0 380 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 FSCN2O14926 492 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 EPHB6O15197 1021 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 LIASO43766 372 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 SASH3O75995 380 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 CALCAP01258 141 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 RPN2P04844 631 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 HOXB6P17509 224 aaKnown RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 PTPRAP18433 802 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 OR1E1P30953 314 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 PSEN1P49768 467 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 PSEN2P49810 448 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 TRIP4Q15650 581 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 DLK2Q6UY11 383 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 CCDC33Q8N5R6 958 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 ALLCQ8N6M5 410 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 PIWIL2Q8TC59 973 aaKnown RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 MAGEB10Q96LZ2 347 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 FHDC1Q9C0D6 1143 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 STARD7Q9NQZ5 370 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 FAM220BPB1ANY3 271 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 E5RJQ4 531 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 IFRD1O00458 451 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 CABYRO75952 493 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 BAIAP3O94812 1187 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 IGSF6O95976 241 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 ANXA6P08133 673 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 CAPZA2P47755 286 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 RPL14P50914 215 aaKnown RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 POLR2LP62875 67 aaKnown RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 GPC2Q8N158 579 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 NKAPQ8N5F7 415 aaKnown RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 ATG16L2Q8NAA4 619 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 RDH11Q8TC12 318 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 ART4Q93070 314 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 ZBTB45Q96K62 511 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 APOL4Q9BPW4 351 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 FAM124BQ9H5Z6 455 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-202ENST00000357250 VPS51Q9UID3 782 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 EFR3BQ9Y2G0 817 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 SNCAIPQ9Y6H5 919 aa11.96□□□□□ -0.49
COL9A1-202ENST00000357250 NRCAMQ92823 1304 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 NCF1BA6NI72 391 aaPredicted RBP11.96□□□□□ -0.5
COL9A1-202ENST00000357250 NCF1CA8MVU1 366 aaPredicted RBP11.96□□□□□ -0.5
COL9A1-202ENST00000357250 MAFO75444 373 aaPredicted RBP11.96□□□□□ -0.5
COL9A1-202ENST00000357250 VAPBO95292 243 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 ZNF286BP0CG31 522 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 NCF1P14598 390 aaPredicted RBP11.96□□□□□ -0.5
COL9A1-202ENST00000357250 RBL1P28749 1068 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 CACNA2D1P54289 1103 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 AIF1P55008 147 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 VAC14Q08AM6 782 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 PHKG1Q16816 387 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 ARMCX4Q5H9R4 360 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 TMC7Q7Z402 723 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 LPCAT1Q8NF37 534 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 TMEM159Q96B96 161 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.5
COL9A1-202ENST00000357250 C6orf203Q9P0P8 240 aaPredicted RBP11.96□□□□□ -0.5
COL9A1-202ENST00000357250 TPRKBQ9Y3C4 175 aa11.96□□□□□ -0.5
COL9A1-202ENST00000357250 LOC102724159A0A0B4J2E5 919 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 RGS14O43566 566 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 CYP2A6P11509 494 aaPredicted RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 SLC2A4P14672 509 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 SERPINH1P50454 418 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PWP2Q15269 919 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 CCDC142Q17RM4 750 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ZACNQ401N2 412 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 DUPD1Q68J44 220 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 NEPROQ6NW34 567 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ZCCHC8Q6NZY4 707 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 FAM117BQ6P1L5 589 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 LRRC74BQ6ZQY2 392 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 METTL3Q86U44 580 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 TSEN2Q8NCE0 465 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 TMEM79Q9BSE2 394 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PLA2G4CQ9UP65 541 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PCDHB12Q9Y5F1 795 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 BIRC5O15392 142 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ETS1P14921 441 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 CLCN5P51795 746 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 AUHQ13825 339 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 VGLL4Q14135 290 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 TMEM26Q6ZUK4 368 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ZNF438Q7Z4V0 828 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 FAM126BQ8IXS8 530 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms