RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ACDQ96AP0 544 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 FAF2Q96CS3 445 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 P2RY11Q96G91 374 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 CSPG4P5Q96PW8 444 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 C2orf49Q9BVC5 232 aaPredicted RBP16.43■□□□□ 0.22
FDPS-201ENST00000356657 MAGEH1Q9H213 219 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 ABCB8Q9NUT2 735 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 GPATCH2LQ9NWQ4 482 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 MPP6Q9NZW5 540 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 CWC15Q9P013 229 aaKnown RBP16.43■□□□□ 0.22
FDPS-201ENST00000356657 PCDHA3Q9Y5H8 950 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 SNX10Q9Y5X0 201 aa16.43■□□□□ 0.22
FDPS-201ENST00000356657 LRRD1A4D1F6 860 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 CNTN5O94779 1100 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.227e-7■■□□□ 11.4
FDPS-201ENST00000356657 COL9A1P20849 921 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 GJC1P36383 396 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 VASPP50552 380 aaPredicted RBP16.42■□□□□ 0.22
FDPS-201ENST00000356657 NDST2P52849 883 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 MRPS21P82921 87 aaKnown RBP16.42■□□□□ 0.22
FDPS-201ENST00000356657 KDSRQ06136 332 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 DPYSL3Q14195 570 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 UBXN2BQ14CS0 331 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 PLEKHG6Q3KR16 790 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 PARP15Q460N3 678 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 IER5LQ5T953 404 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 FSTL4Q6MZW2 842 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 RCOR2Q8IZ40 523 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 ZNF687Q8N1G0 1237 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 KDM1BQ8NB78 822 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 CLDN23Q96B33 292 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 LMLNQ96KR4 655 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 CALN1Q9BXU9 219 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 SIT1Q9Y3P8 196 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
FDPS-201ENST00000356657 A0A0U1RQJ8 604 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 FAM170BA6NMN3 283 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 KIF5CO60282 957 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 RAMP2O60895 175 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 ATG13O75143 517 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 KRT1P04264 644 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 ZFXP17010 805 aaPredicted RBP16.42■□□□□ 0.22
FDPS-201ENST00000356657 AOC1P19801 751 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 KDELR1P24390 212 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 TARSP26639 723 aaKnown RBP16.42■□□□□ 0.22
FDPS-201ENST00000356657 SLC6A11P48066 632 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 RWDD2BP57060 319 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 LMAN2Q12907 356 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 TMCO3Q6UWJ1 677 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 TFAP2DQ7Z6R9 452 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 CIR1Q86X95 450 aaPredicted RBP16.42■□□□□ 0.22
FDPS-201ENST00000356657 LRRC49Q8IUZ0 686 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 REXO1L1PQ8IX06 675 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 DCAF4L2Q8NA75 395 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 ATRIPQ8WXE1 791 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 TTC17Q96AE7 1141 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 TRIM44Q96DX7 344 aaPredicted RBP16.42■□□□□ 0.22
FDPS-201ENST00000356657 MUC3BQ9H195 1237 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 GOLPH3Q9H4A6 298 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 EFR3BQ9Y2G0 817 aa16.42■□□□□ 0.22
FDPS-201ENST00000356657 ZSCAN5CA6NGD5 496 aaPredicted RBP16.41■□□□□ 0.22
FDPS-201ENST00000356657 STK25O00506 426 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 CHRNB1P11230 501 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 HNRNPLP14866 589 aaKnown RBP eCLIP16.41■□□□□ 0.22
FDPS-201ENST00000356657 ERCC2P18074 760 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
FDPS-201ENST00000356657 PTPN7P35236 360 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 IRAK1P51617 712 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 GEMIN4P57678 1058 aaKnown RBP16.41■□□□□ 0.22
FDPS-201ENST00000356657 GNA12Q03113 381 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 PPP2R5EQ16537 467 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 TAZQ16635 292 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 TFDP3Q5H9I0 405 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 FSCBQ5H9T9 825 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 PITRM1Q5JRX3 1037 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 METTL3Q86U44 580 aaKnown RBP16.41■□□□□ 0.22
FDPS-201ENST00000356657 CPNE8Q86YQ8 564 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 CCDC105Q8IYK2 499 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 WFDC5Q8TCV5 224 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 HES6Q96HZ4 224 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 FEM1AQ9BSK4 669 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 VPS28Q9UK41 221 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 CLEC4EQ9ULY5 219 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 NDRG2Q9UN36 371 aaKnown RBP16.41■□□□□ 0.22
FDPS-201ENST00000356657 HYOU1Q9Y4L1 999 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 RAD54BQ9Y620 910 aa16.41■□□□□ 0.22
FDPS-201ENST00000356657 NUP205Q92621 2012 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 CHURC1-FNTBB4DL54 471 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 K7EQS6 105 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 DCLK1O15075 740 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 PDGFBP01127 241 aaPredicted RBP16.4■□□□□ 0.22
FDPS-201ENST00000356657 SRPRAP08240 638 aaKnown RBP16.4■□□□□ 0.22
FDPS-201ENST00000356657 DLDP09622 509 aaKnown RBP16.4■□□□□ 0.22
FDPS-201ENST00000356657 CD72P21854 359 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 IL4RP24394 825 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 CD70P32970 193 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 TFDP2Q14188 446 aa16.4■□□□□ 0.22
FDPS-201ENST00000356657 POLD3Q15054 466 aaPredicted RBP16.4■□□□□ 0.22
FDPS-201ENST00000356657 GEN1Q17RS7 908 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms