RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 H0YIN7 160 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 CSPG5O95196 566 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 SNRPAP09012 282 aaKnown RBP16.06■□□□□ 0.16
RTN3-205ENST00000356000 KIAA0408Q6ZU52 694 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 NAT8LQ8N9F0 302 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 SNX31Q8N9S9 440 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 LILRB1Q8NHL6 650 aaPredicted RBP16.06■□□□□ 0.16
RTN3-205ENST00000356000 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
RTN3-205ENST00000356000 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
RTN3-205ENST00000356000 SP140LQ9H930 580 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
RTN3-205ENST00000356000 VWA5AO00534 786 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 SNPHO15079 494 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 RFPL1O75677 317 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 FGFR3P22607 806 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 BCAMP50895 628 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 PKNOX1P55347 436 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 SELPLGQ14242 412 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 MTX3Q5HYI7 312 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 SLC26A11Q86WA9 606 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 DNAJC10Q8IXB1 793 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 RHOT1Q8IXI2 618 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 FAM71AQ8IYT1 594 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 BEND7Q8N7W2 519 aaPredicted RBP16.06■□□□□ 0.16
RTN3-205ENST00000356000 CPT1BQ92523 772 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 APBB2Q92870 758 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 PSKH2Q96QS6 385 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 CSF3RQ99062 836 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 MAGEE1Q9HCI5 957 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 ZNF304Q9HCX3 659 aa16.06■□□□□ 0.16
RTN3-205ENST00000356000 GPR25O00155 361 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 ENPP3O14638 875 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 TOM1L1O75674 476 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 RFPL2O75678 378 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 SEC14L2O76054 403 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 WEE2P0C1S8 567 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 SLC1A6P48664 564 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 NEDD8Q15843 81 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 INSCQ1MX18 579 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 BBS9Q3SYG4 887 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 FAM182AQ5T1J6 154 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 STYK1Q6J9G0 422 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 ZBTB49Q6ZSB9 765 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 MFSD2AQ8NA29 543 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 VPS33AQ96AX1 596 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 VMP1Q96GC9 406 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 GLT1D1Q96MS3 346 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 UHRF1Q96T88 793 aaPredicted RBP16.05■□□□□ 0.16
RTN3-205ENST00000356000 TRPV6Q9H1D0 765 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 PCDHAC2Q9Y5I4 1007 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 LRRIQ4A6NIV6 560 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 KRT37O76014 449 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 IL32P24001 234 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 SSTR3P32745 418 aaPredicted RBP16.05■□□□□ 0.16
RTN3-205ENST00000356000 CASP3P42574 277 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 ATXN3P54252 364 aaPredicted RBP16.05■□□□□ 0.16
RTN3-205ENST00000356000 NME5P56597 212 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
RTN3-205ENST00000356000 CLCQ05315 142 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 CARTPTQ16568 116 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 ZCCHC8Q6NZY4 707 aaKnown RBP16.05■□□□□ 0.16
RTN3-205ENST00000356000 OTOP3Q7RTS5 596 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 ADAMTSL2Q86TH1 951 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 SLC47A2Q86VL8 602 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 PGAM4Q8N0Y7 254 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 SLC4A11Q8NBS3 891 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 SIMC1Q8NDZ2 872 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 TMEM117Q9H0C3 514 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 CPVLQ9H3G5 476 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 SMOXQ9NWM0 555 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 RNF181Q9P0P0 153 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
RTN3-205ENST00000356000 ZNF229Q9UJW7 825 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 MAU2Q9Y6X3 613 aa16.05■□□□□ 0.16
RTN3-205ENST00000356000 EVPLLA8MZ36 301 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 CCDC159P0C7I6 412 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 JUNBP17275 347 aaPredicted RBP16.04■□□□□ 0.16
RTN3-205ENST00000356000 TAS2R40P59535 323 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 TNK2Q07912 1038 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 SLFN13Q68D06 897 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 MBLAC2Q68D91 279 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 DCLK2Q8N568 766 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 DNAJC5GQ8N7S2 189 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 TRIM63Q969Q1 353 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 MAP6Q96JE9 813 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 PKD2L1Q9P0L9 805 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 HMGXB4Q9UGU5 601 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 AFG3L2Q9Y4W6 797 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 CACNA1SQ13698 1873 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 ZW10O43264 779 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 MED24O75448 989 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 GPC4O75487 556 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 PROSCO94903 275 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 IL18RAPO95256 599 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 ITGAVP06756 1048 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 CD58P19256 250 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 GARTP22102 1010 aa16.04■□□□□ 0.16
RTN3-205ENST00000356000 CRHR1P34998 444 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms