RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 SMARCD1Q96GM5 515 aa11.43□□□□□ -0.58
NEIL1-201ENST00000355059 PCED1BQ96HM7 432 aa11.43□□□□□ -0.58
NEIL1-201ENST00000355059 MCOLN1Q9GZU1 580 aa11.43□□□□□ -0.58
NEIL1-201ENST00000355059 ARHGEF3Q9NR81 526 aa11.43□□□□□ -0.58
NEIL1-201ENST00000355059 TMEM161AQ9NX61 479 aa11.43□□□□□ -0.58
NEIL1-201ENST00000355059 DRG1Q9Y295 367 aaKnown RBP11.43□□□□□ -0.58
NEIL1-201ENST00000355059 COMMD10Q9Y6G5 202 aa11.43□□□□□ -0.58
NEIL1-201ENST00000355059 MEI4A8MW99 385 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 ATP9BO43861 1147 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 LINGO3P0C6S8 592 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 IGFBP6P24592 240 aaPredicted RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 PPM1FP49593 454 aaPredicted RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 RPL10AP62906 217 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 FNBP1LQ5T0N5 605 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 CLIP3Q96DZ5 547 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 APOPT1Q96IL0 206 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 DHRS1Q96LJ7 313 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 WDCPQ9H6R7 721 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 ARL8BQ9NVJ2 186 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 DSEQ9UL01 958 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 STYXL1Q9Y6J8 313 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 TRIP12Q14669 1992 aaPredicted RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 DPYSL4O14531 572 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 PTGESO14684 152 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 SPAG6O75602 509 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 FAM155BO75949 473 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 ERBB2P04626 1255 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 RBL1P28749 1068 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 GDF10P55107 478 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 YWHAZP63104 245 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 WASHC2DQ5SRD0 308 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 LHX8Q68G74 356 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 OLFML1Q6UWY5 402 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 LRRC43Q8N309 656 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 KLHDC9Q8NEP7 349 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 OXNAD1Q96HP4 312 aaPredicted RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 TMEM209Q96SK2 561 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 ACSS3Q9H6R3 686 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 TYW5A2RUC4 315 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 CXCL14O95715 111 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 ITGAVP06756 1048 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 RPL9P32969 192 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 ELAVL2Q12926 359 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 RNASEH2BQ5TBB1 312 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 TFAP2DQ7Z6R9 452 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 CLNKQ7Z7G1 428 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 OSTM1Q86WC4 334 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 CPT1BQ92523 772 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 PABPC5Q96DU9 382 aaKnown RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 TTPALQ9BTX7 342 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 LRMDAQ9H2I8 198 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 DENND2DQ9H6A0 471 aaPredicted RBP11.42□□□□□ -0.58
NEIL1-201ENST00000355059 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
NEIL1-201ENST00000355059 H7C4K7 107 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 DDHD2O94830 711 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SKIV2L2P42285 1042 aaKnown RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 CDK16Q00536 496 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 MYBPC3Q14896 1274 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 C16orf46Q6P387 395 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 DENND5BQ6ZUT9 1274 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 PDZD4Q76G19 769 aaPredicted RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SCUBE1Q8IWY4 988 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 DCLK2Q8N568 766 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SCG3Q8WXD2 468 aaKnown RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 ARNTL2Q8WYA1 636 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SLCO2A1Q92959 643 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 CELF6Q96J87 481 aaKnown RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 GORASP1Q9BQQ3 440 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 NFKBIZQ9BYH8 718 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 PTPRHQ9HD43 1115 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 MRPL17Q9NRX2 175 aaKnown RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SFMBT1Q9UHJ3 866 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 ADGRA2Q96PE1 1338 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 TCRBV9S1A1TA0A576 114 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 APOC4-APOC2K7ER74 178 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 TRDMT1O14717 391 aaKnown RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 TSPAN3O60637 253 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 APOC2P02655 101 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 CDKN2BP42772 138 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SLC11A1P49279 550 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 UBXN11Q5T124 520 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 MAP3K21Q5TCX8 1036 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 RHBDF2Q6PJF5 856 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 ST13P4Q8IZP2 240 aaPredicted RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 RSPH1Q8WYR4 309 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 CNPY3Q9BT09 278 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 NRDE2Q9H7Z3 1164 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 RHBDL2Q9NX52 303 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 FOCADQ5VW36 1801 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 SMNDC1O75940 238 aaKnown RBP eCLIP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 ATXN1P54253 815 aaKnown RBP11.41□□□□□ -0.58
NEIL1-201ENST00000355059 TRIP10Q15642 601 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 USP41Q3LFD5 358 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 DNAL1Q4LDG9 190 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 LRRC38Q5VT99 294 aa11.41□□□□□ -0.58
NEIL1-201ENST00000355059 BBS12Q6ZW61 710 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms