RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TMEM30AQ9NV96 361 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 SLC17A6Q9P2U8 582 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 DSEQ9UL01 958 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 FAM155AB1AL88 458 aaPredicted RBP22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 ZNF623O75123 536 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 SERPINE1P05121 402 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 SERPINA6P08185 405 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 GNAZP19086 355 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 ELF1P32519 619 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 CDK7P50613 346 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 RAB27AP51159 221 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 RABGGTBP53611 331 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 PRPSAP1Q14558 356 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 C16orf46Q6P387 395 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 TMPRSS6Q8IU80 811 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 NPWQ8N729 165 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 MYLPFQ96A32 169 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 FCRL3Q96P31 734 aaPredicted RBP22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 C20orf27Q9GZN8 174 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 OSBPL2Q9H1P3 480 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 ZNF395Q9H8N7 513 aaPredicted RBP22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 CASTOR2A6NHX0 329 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 CYP11A1P05108 521 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 KITP10721 976 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 FGF3P11487 239 aaPredicted RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 GM2AP17900 193 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 SLC1A6P48664 564 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 IRX4P78413 519 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 GDF6Q6KF10 455 aaPredicted RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 RINLQ6ZS11 566 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 SERINC5Q86VE9 423 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 TEX9Q8N6V9 391 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 ZNF669Q96BR6 464 aaPredicted RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 TEKT5Q96M29 485 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 RILPQ96NA2 401 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 RBBP8Q99708 897 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 IL22Q9GZX6 179 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 NKX1-2Q9UD57 310 aaPredicted RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 ZNF638Q14966 1978 aaKnown RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 TOP3BO95985 862 aaKnown RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 PROCP04070 461 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 RPSAP08865 295 aaKnown RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 CYBAP13498 195 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 CD68P34810 354 aaPredicted RBP22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 MAGEA12P43365 314 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 SERPINB8P50452 374 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 ANKRD20A4Q4UJ75 823 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 PPP4R1Q8TF05 950 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 EDEM1Q92611 657 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 SPC25Q9HBM1 224 aa22.76■■□□□ 1.23
NKX2-1-201ENST00000354822 LRIG2O94898 1065 aa22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 TEDDM1Q5T9Z0 273 aa22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 MFSD14CQ5VZR4 134 aa22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 CES3Q6UWW8 571 aa22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 ZCCHC23Q6ZST2 131 aa22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 DMAP1Q9NPF5 467 aaPredicted RBP22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 ARMCX1Q9P291 453 aa22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 MARCOQ9UEW3 520 aaPredicted RBP22.75■■□□□ 1.23
NKX2-1-201ENST00000354822 ZCWPW2A0A1B0GU75 182 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 MPOP05164 745 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 CTSHP09668 335 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 LIMK2P53671 638 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 RPL10AP62906 217 aaKnown RBP22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 PCLAFQ15004 111 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 MAPRE1Q15691 268 aaKnown RBP22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 CXCL17Q6UXB2 119 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 STRA8Q7Z7C7 330 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 LINC00523Q86TU6 105 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 N4BP2L2Q92802 583 aaPredicted RBP22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 RNF34Q969K3 372 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 RTP3Q9BQQ7 232 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 SNX15Q9NRS6 342 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 COPG2Q9UBF2 871 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 TAGLN3Q9UI15 199 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 TLL2Q9Y6L7 1015 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 ARHGAP42A6NI28 874 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 AMHP03971 560 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 FCGRTP55899 365 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 MGAT3Q09327 533 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 NAPEPLDQ6IQ20 393 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 UPF3AQ9H1J1 476 aaKnown RBP22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 SCN10AQ9Y5Y9 1956 aa22.74■■□□□ 1.23
NKX2-1-201ENST00000354822 ARHGEF37A1IGU5 675 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 B2RBV5 119 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 CA12O43570 354 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 TIMM44O43615 452 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 MAGEC1O60732 1142 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 USP12O75317 370 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 ENTPD5O75356 428 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 B3GAT3O94766 335 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 NFKB1P19838 968 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 KCNA4P22459 653 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 HTR7P34969 479 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 HADHAP40939 763 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 TM4SF4P48230 202 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 CSE1LP55060 971 aaKnown RBP22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 ZBTB17Q13105 803 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 DCLK2Q8N568 766 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 TSGA13Q96PP4 275 aa22.73■■□□□ 1.23
NKX2-1-201ENST00000354822 MLPHQ9BV36 600 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms