RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 RPL14P50914 215 aaKnown RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 CXCL9Q07325 125 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 PRKAA1Q13131 559 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 TMEM132DQ14C87 1099 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 MYLK3Q32MK0 819 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 IRAK1BP1Q5VVH5 260 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 SPATA31D4Q6ZUB0 917 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 TMEM192Q8IY95 271 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 CDRT15Q96T59 188 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 SHCBP1LQ9BZQ2 653 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 IL22Q9GZX6 179 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
CAPN9-202ENST00000354537 GALNT8Q9NY28 637 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
CAPN9-202ENST00000354537 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 AIM2O14862 343 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 ADCY6O43306 1168 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 MAP3K6O95382 1288 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 PYGLP06737 847 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 CSRP3P50461 194 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SESN2P58004 480 aaPredicted RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 USP46P62068 366 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SULT2A1Q06520 285 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 USP4Q13107 963 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 MYBPC3Q14896 1274 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 PDK1Q15118 436 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SEL1L3Q68CR1 1132 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 TMEM135Q86UB9 458 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SNX32Q86XE0 403 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 MAPK15Q8TD08 544 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 OR52B2Q96RD2 323 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 GATA5Q9BWX5 397 aaPredicted RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 NMRAL1Q9HBL8 299 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 PREBQ9HCU5 417 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SYBUQ9NX95 663 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 NSMCE4AQ9NXX6 385 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 RAD54BQ9Y620 910 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 A0A096LPK6 155 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 ERI2A8K979 691 aaKnown RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 CABYRO75952 493 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 CYP2C9P11712 490 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 PHKA2P46019 1235 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 RGS7P49802 495 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 THOP1P52888 689 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 HMGCS2P54868 508 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 TXNL4AP83876 142 aaKnown RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SLC10A6Q3KNW5 377 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 ZYG11AQ6WRX3 759 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 NAPRTQ6XQN6 538 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 UNC93AQ86WB7 457 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 TTC30AQ86WT1 665 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 RBM12BQ8IXT5 1001 aaKnown RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 LRRC71Q8N4P6 559 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 DIS3LQ8TF46 1054 aaKnown RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 PDCD6IPQ8WUM4 868 aaKnown RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 DUS3LQ96G46 650 aaKnown RBP11.66□□□□□ -0.54
CAPN9-202ENST00000354537 GPR20Q99678 358 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 SLC17A6Q9P2U8 582 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 RPS6KL1Q9Y6S9 549 aa11.66□□□□□ -0.54
CAPN9-202ENST00000354537 AP3B1O00203 1094 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 RNF103O00237 685 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 ACOT8O14734 319 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 ZMPSTE24O75844 475 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 COL6A2P12110 1019 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 IMPDH2P12268 514 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 ACADSBP45954 432 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 POLD2P49005 469 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 INHBCP55103 352 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 FSTL1Q12841 308 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 IFRD2Q12894 506 aaPredicted RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 DCTN2Q13561 401 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 LSM12Q3MHD2 195 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 PPP1R26Q5T8A7 1209 aaPredicted RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 LIPMQ5VYY2 423 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 DPH6Q7L8W6 267 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 STRA8Q7Z7C7 330 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 SCUBE3Q8IX30 993 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 TMEM102Q8N9M5 508 aaPredicted RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 URGCPQ8TCY9 931 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 P2RY11Q96G91 374 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 MCMBPQ9BTE3 642 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 DNAI2Q9GZS0 605 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 DPP3Q9NY33 737 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 LMCD1Q9NZU5 365 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 PIK3R2O00459 728 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 TRIM38O00635 465 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 HBP1O60381 514 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 HSPA1AP0DMV8 641 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 HSPA1BP0DMV9 641 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 ERVK-10P10266 1014 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 ZNF23P17027 643 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 XRCC1P18887 633 aaPredicted RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 RPS12P25398 132 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 SERPINB5P36952 375 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 TUBA4AP68366 448 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 MRPS22P82650 360 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 PEX6Q13608 980 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms