RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TCOF1Q13428 1488 aaKnown RBP8.18□□□□□ -1.1
SCN8A-201ENST00000354534 USP17L3A6NCW0 530 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 USP17L4A6NCW7 530 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 TOR1AIP1Q5JTV8 583 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 USP17L1Q7RTZ2 530 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 EPS8L3Q8TE67 593 aaKnown RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PYDC1Q8WXC3 89 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 CLPBQ9H078 707 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 UBDO15205 165 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 KCNJ1P48048 391 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 GALK1P51570 392 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 STRA8Q7Z7C7 330 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 COL23A1Q86Y22 540 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ABCB9Q9NP78 766 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 NDOR1Q9UHB4 597 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 KIAA1257Q9ULG3 409 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 SEPHS1P49903 392 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 MTF1Q14872 753 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 REPS1Q96D71 796 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ACAT2Q9BWD1 397 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF302Q9NR11 478 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 GRHL1Q9NZI5 618 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 SLCO1B7G3V0H7 640 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 MTA2O94776 668 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 RGS8P57771 180 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ILF3Q12906 894 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 DNAJC10Q8IXB1 793 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 BHLHE22Q8NFJ8 381 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 KBTBD8Q8NFY9 601 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 POLR3FQ9H1D9 316 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 AHSPQ9NZD4 102 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ITIH6Q6UXX5 1313 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ASS1P00966 412 aaKnown RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 DNAJC14Q6Y2X3 702 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PLCZ1Q86YW0 608 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 EAF2Q96CJ1 260 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 BTBD10Q9BSF8 475 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PCDHA6Q9UN73 950 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PADI2Q9Y2J8 665 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PCDHA8Q9Y5H6 950 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 A0A075B6Q4 140 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 SLC10A7Q0GE19 358 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 WDR59Q6PJI9 974 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 IFT46Q9NQC8 304 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 CKLFQ9UBR5 152 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 C2CD2LO14523 706 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ZBTB11O95625 1053 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 MYCBPAPQ8TBZ2 947 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 DYNLL2Q96FJ2 89 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ZMYM5Q9UJ78 669 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 FCHO1O14526 889 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 SSX4O60224 188 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ARFIP1P53367 373 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 MRPS22P82650 360 aaKnown RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 DENND5BQ6ZUT9 1274 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 PNPT1Q8TCS8 783 aaKnown RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 SMG7Q92540 1137 aaKnown RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 NKD1Q969G9 470 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 GMPPBQ9Y5P6 360 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 MDFIC2A0A1B0GVS7 189 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 GATBO75879 557 aaKnown RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 UGT1A5P35504 534 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 GPAT3Q53EU6 434 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 OAFQ86UD1 273 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 RAB43Q86YS6 212 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF567Q8N184 647 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 ZBTB8BQ8NAP8 495 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-201ENST00000354534 SGCDQ92629 289 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 RAD54LQ92698 747 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 RAPGEFL1Q9UHV5 662 aa8.17□□□□□ -1.1
SCN8A-201ENST00000354534 SERPINF2P08697 491 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ETS2P15036 469 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 BGNP21810 368 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ADSSP30520 456 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 NPY2RP49146 381 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 GPR15P49685 360 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PRKG2Q13237 762 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SLC22A9Q8IVM8 553 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 FBXO30Q8TB52 745 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 TUBGCP5Q96RT8 1024 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ACTR8Q9H981 624 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 RABL2AQ9UBK7 228 aaPredicted RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 STARD13Q9Y3M8 1113 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SGTAO43765 313 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SEC22BO75396 215 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 OXCT1P55809 520 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ZC2HC1CQ53FD0 456 aaPredicted RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CHST4Q8NCG5 386 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 UCMAQ8WVF2 138 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CHP1Q99653 195 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ERP44Q9BS26 406 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 GNG13Q9P2W3 67 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CNTRLQ7Z7A1 2325 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 A0A1W2PQC6 194 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PLEKHA8P1O95397 391 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 MAD2L1Q13257 205 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms