RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SLC45A1Q9Y2W3 748 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 FGF10O15520 208 aaPredicted RBP13.98□□□□□ -0.17
SMC6-201ENST00000351948 SH3BGRLO75368 114 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 LRCH4O75427 683 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 ATP5BP06576 529 aaKnown RBP13.98□□□□□ -0.17
SMC6-201ENST00000351948 MTFR1Q15390 333 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 N4BP2L1Q5TBK1 243 aaPredicted RBP13.98□□□□□ -0.17
SMC6-201ENST00000351948 LRRC38Q5VT99 294 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 SLC39A4Q6P5W5 647 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 CPNE8Q86YQ8 564 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 TDRD5Q8NAT2 981 aaKnown RBP13.98□□□□□ -0.17
SMC6-201ENST00000351948 HAUS8Q9BT25 410 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 HACD1B0YJ81 288 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 CTPS1P17812 591 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 AARSP49588 968 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMC6-201ENST00000351948 AMPD2Q01433 879 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 GBE1Q04446 702 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 ERAP2Q6P179 960 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 ZCCHC23Q6ZST2 131 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 LHX5Q9H2C1 402 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 B2RBV5 119 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 NEDD8-MDP1E9PL57 170 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 CLASP2O75122 1294 aaKnown RBP13.98□□□□□ -0.17
SMC6-201ENST00000351948 PGAM1P18669 254 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 CHKAP35790 457 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 ZNF844Q08AG5 666 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 SGCGQ13326 291 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 BBS12Q6ZW61 710 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 TTC7BQ86TV6 843 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 CIR1Q86X95 450 aaPredicted RBP13.98□□□□□ -0.17
SMC6-201ENST00000351948 CCDC138Q96M89 665 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 PCYT2Q99447 389 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 TRIM15Q9C019 465 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 RUBCNLQ9H714 662 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 KATNA1O75449 491 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 CPA3P15088 417 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 ADRA1BP35368 520 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 PSEN1P49768 467 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 PARP6Q2NL67 630 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 GET4Q7L5D6 327 aaPredicted RBP13.97□□□□□ -0.17
SMC6-201ENST00000351948 NFKBIZQ9BYH8 718 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 DNAJC16Q9Y2G8 782 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 CFHP08603 1231 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 MSH3P20585 1137 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 GP5P40197 560 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 SERPINH1P50454 418 aaKnown RBP13.97□□□□□ -0.17
SMC6-201ENST00000351948 GALNT3Q14435 633 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 HIC1Q14526 733 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 SOWAHAQ2M3V2 549 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 MON1BQ7L1V2 547 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 DET1Q7L5Y6 550 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 KDM4CQ9H3R0 1056 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 A0A096LPK6 155 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 CES2O00748 559 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 PAPSS1O43252 624 aaPredicted RBP13.97□□□□□ -0.17
SMC6-201ENST00000351948 SHBGP04278 402 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 JAM2P57087 298 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 PLCL1Q15111 1095 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 SH3PXD2AQ5TCZ1 1133 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 TRPM8Q7Z2W7 1104 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 PSTKQ8IV42 348 aaKnown RBP13.97□□□□□ -0.17
SMC6-201ENST00000351948 ST13P5Q8NFI4 369 aaPredicted RBP13.97□□□□□ -0.17
SMC6-201ENST00000351948 TCP10LQ8TDR4 215 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 SIX2Q9NPC8 291 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 MORF4L1Q9UBU8 362 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 SERPINB5P36952 375 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 ASPAP45381 313 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 HDAC4P56524 1084 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 PLEKHA7Q6IQ23 1121 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 DQX1Q8TE96 717 aaKnown RBP13.97□□□□□ -0.17
SMC6-201ENST00000351948 CAVIN3Q969G5 261 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 TWNKQ96RR1 684 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 ZNF670Q9BS34 389 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 MRPL1Q9BYD6 325 aaKnown RBP13.97□□□□□ -0.17
SMC6-201ENST00000351948 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 ZNF212Q9UDV6 495 aa13.97□□□□□ -0.17
SMC6-201ENST00000351948 SASH3O75995 380 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 IL1BP01584 269 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 SERPINA4P29622 427 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 LDLRAD1Q5T700 205 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 RASIP1Q5U651 963 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 PKN3Q6P5Z2 889 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 TBC1D19Q8N5T2 526 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 ALLCQ8N6M5 410 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 SMG7Q92540 1137 aaKnown RBP13.96□□□□□ -0.17
SMC6-201ENST00000351948 TCF25Q9BQ70 676 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
SMC6-201ENST00000351948 HEY2Q9UBP5 337 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 COL16A1Q07092 1604 aaPredicted RBP13.96□□□□□ -0.17
SMC6-201ENST00000351948 E9PBE3 544 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 KLHL41O60662 606 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 F2P00734 622 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 CHRNB2P17787 502 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms