RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 LRRC39Q96DD0 335 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 APBA2Q99767 749 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 ILKAPQ9H0C8 392 aaPredicted RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 POLR3FQ9H1D9 316 aaPredicted RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 GABBR1Q9UBS5 961 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 FZD1Q9UP38 647 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 SOCS2O14508 198 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 TPST1O60507 370 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 CNOT3O75175 753 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 MAP4P27816 1152 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 GABRB3P28472 473 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 GTF2A2P52657 109 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 MRPS9P82933 396 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 FAM102AQ5T9C2 384 aaPredicted RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 GALNT18Q6P9A2 607 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 ARMCX6Q7L4S7 300 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 EIF2AQ9BY44 585 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 SFMBT1Q9UHJ3 866 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 CNOT11Q9UKZ1 510 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 MYO18AQ92614 2054 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 RBBP6Q7Z6E9 1792 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 LRRIQ4A6NIV6 560 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 LYPLA2O95372 231 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 STILQ15468 1287 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 DLG2Q15700 870 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 STXBP5Q5T5C0 1151 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 SEL1L3Q68CR1 1132 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 THOC7Q6I9Y2 204 aaKnown RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 PRR5LQ6MZQ0 368 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 DCLRE1AQ6PJP8 1040 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 SIX6OS1Q8N1H7 587 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 CHPT1Q8WUD6 406 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 LPGAT1Q92604 370 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 TAMM41Q96BW9 452 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 SNX27Q96L92 541 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 RNF157Q96PX1 679 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 MTMR12Q9C0I1 747 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 CAB39LQ9H9S4 337 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 MOCS1Q9NZB8 636 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 SEPT9Q9UHD8 586 aaPredicted RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 CCPG1Q9ULG6 757 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 MAGED2Q9UNF1 606 aaPredicted RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 FIS1Q9Y3D6 152 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 HES2Q9Y543 173 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 ZNF839A8K0R7 811 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 TRIM38O00635 465 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 NOL3O60936 208 aaKnown RBP15.65■□□□□ 0.1
LMNA-201ENST00000347559 BAIAP3O94812 1187 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 ERBB2P04626 1255 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 SAT1P21673 171 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 EPHX2P34913 555 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 RAP1GAPP47736 663 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 RAB15P59190 212 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 RAB39AQ14964 217 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 ZC3H7AQ8IWR0 971 aaKnown RBP15.65■□□□□ 0.1
LMNA-201ENST00000347559 FAM110BQ8TC76 370 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 CYGBQ8WWM9 190 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 NTPCRQ9BSD7 190 aaKnown RBP15.65■□□□□ 0.1
LMNA-201ENST00000347559 GATA5Q9BWX5 397 aaPredicted RBP15.65■□□□□ 0.1
LMNA-201ENST00000347559 ZNF518BQ9C0D4 1074 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 SNX15Q9NRS6 342 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 ARHGAP28Q9P2N2 729 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 VPS51Q9UID3 782 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 KCNU1A8MYU2 1149 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 APOL1O14791 398 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 PRPSAP2O60256 369 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 CLDN10P78369 228 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 IRF9Q00978 393 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 FAM47CQ5HY64 1035 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 PERM1Q5SV97 790 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 RSBN1LQ6PCB5 846 aaPredicted RBP15.65■□□□□ 0.1
LMNA-201ENST00000347559 GK5Q6ZS86 529 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 OFCC1Q8IZS5 231 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 CGRRF1Q99675 332 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 ADPGKQ9BRR6 497 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 NPLQ9BXD5 320 aaPredicted RBP15.65■□□□□ 0.1
LMNA-201ENST00000347559 ANKRD60Q9BZ19 345 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 ANKEF1Q9NU02 776 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 KIAA1522Q9P206 1035 aaPredicted RBP15.65■□□□□ 0.1
LMNA-201ENST00000347559 DAPK2Q9UIK4 370 aa15.65■□□□□ 0.1
LMNA-201ENST00000347559 FAM149AA5PLN7 773 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.64■□□□□ 0.09
LMNA-201ENST00000347559 ESRRBO95718 433 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 JUNP05412 331 aaKnown RBP15.64■□□□□ 0.09
LMNA-201ENST00000347559 YAP1P46937 504 aaKnown RBP15.64■□□□□ 0.09
LMNA-201ENST00000347559 PSME3P61289 254 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
LMNA-201ENST00000347559 ANKRD26P1Q6NSI1 321 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 CHSY3Q70JA7 882 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 ZBTB33Q86T24 672 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 SNX31Q8N9S9 440 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 TMEM143Q96AN5 459 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 DUS2Q9NX74 493 aaKnown RBP15.64■□□□□ 0.09
LMNA-201ENST00000347559 FBXO40Q9UH90 709 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 E7ENX8 843 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 HDAC3O15379 428 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 KCNH1O95259 989 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 PIGNO95427 931 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 PAX3P23760 479 aa15.64■□□□□ 0.09
LMNA-201ENST00000347559 MGAT1P26572 445 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms