RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 JOSD2Q8TAC2 188 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 NETO1Q8TDF5 533 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 GANCQ8TET4 914 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 CPLX3Q8WVH0 158 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 SYN2Q92777 582 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 LMLNQ96KR4 655 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 CCDC114Q96M63 670 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 MCEEQ96PE7 176 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 CNPY3Q9BT09 278 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 NUSAP1Q9BXS6 441 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 ZYG11BQ9C0D3 744 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 RETREG1Q9H6L5 497 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 CD248Q9HCU0 757 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 PARD6AQ9NPB6 346 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 INTS6Q9UL03 887 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 SCINQ9Y6U3 715 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 EML5Q05BV3 1969 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 THADAQ6YHU6 1953 aa16.22■□□□□ 0.19
TSPAN4-201ENST00000346501 DRGXA6NNA5 263 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 RTN2O75298 545 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 RNF8O76064 485 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 MYBL1P10243 752 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 ZNF143P52747 638 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 ATXN1P54253 815 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 AIF1P55008 147 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 ZNF33AQ06730 810 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 TRIM14Q14142 442 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 EFHC2Q5JST6 749 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 TRNP1Q6NT89 227 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 RWDD4Q6NW29 188 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 SLFN11Q7Z7L1 901 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 C14orf80Q86SX3 495 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 CACUL1Q86Y37 369 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 CEP76Q8TAP6 659 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 TOE1Q96GM8 510 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 RPL10LQ96L21 214 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 NCAPGQ9BPX3 1015 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 FEM1AQ9BSK4 669 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 TTYH3Q9C0H2 523 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 SLC6A17Q9H1V8 727 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 MRPL47Q9HD33 250 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 PRSS16Q9NQE7 514 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 USP36Q9P275 1121 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 PPARGC1AQ9UBK2 798 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 OR12D3Q9UGF7 316 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 SUSD2Q9UGT4 822 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 MBD1Q9UIS9 605 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 CAPN11Q9UMQ6 739 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 TBC1D30Q9Y2I9 924 aa16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-201ENST00000346501 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 MEI4A8MW99 385 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 FTLP02792 175 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 SERPING1P05155 500 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 GNSP15586 552 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 RRM1P23921 792 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 MZF1P28698 734 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 TPMTP51580 245 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 COPAP53621 1224 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 ARID5BQ14865 1188 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 NFKBIBQ15653 356 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 CCDC6Q16204 474 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 RSPO4Q2I0M5 234 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 PLA2G2CQ5R387 149 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 IL31Q6EBC2 164 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 CXorf57Q6NSI4 855 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 ZNF783Q6ZMS7 281 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 ZNF571Q7Z3V5 609 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 BNIPLQ7Z465 357 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 FRMD1Q8N878 549 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 CADM4Q8NFZ8 388 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 CENPIQ92674 756 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 NTAN1Q96AB6 310 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 HSPA12BQ96MM6 686 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 ADAM33Q9BZ11 813 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 OSBPL2Q9H1P3 480 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 ZNHIT6Q9NWK9 470 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 DONSONQ9NYP3 566 aa16.2■□□□□ 0.18
TSPAN4-201ENST00000346501 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 ABCA7Q8IZY2 2146 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 IGLV3-10A0A075B6K4 115 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 CNTN5O94779 1100 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 GJB6O95452 261 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 SKILP12757 684 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 TGM1P22735 817 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 PSMA2P25787 234 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 PBX1P40424 430 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 PTGER3P43115 390 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 CTSOP43234 321 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 ATXN3P54252 364 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 NRG1Q02297 640 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 SF3A2Q15428 464 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 RETSATQ6NUM9 610 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 TFAP2DQ7Z6R9 452 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 DEFB119Q8N690 84 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 OR8D1Q8WZ84 308 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 ZNF653Q96CK0 615 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 TBC1D31Q96DN5 1066 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 OMDQ99983 421 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms