RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FSBPO95073 299 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 ERBB2P04626 1255 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 TPM2P07951 284 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 C1SP09871 688 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 ACSL1P33121 698 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 NNMTP40261 264 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 CTSOP43234 321 aaPredicted RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 ECT2LQ008S8 904 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 SLC6A3Q01959 620 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 HNRNPA1L2Q32P51 320 aaKnown RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 MIIPQ5JXC2 388 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 RABGAP1LQ5R372 815 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 FAM71AQ8IYT1 594 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 OXR1Q8N573 874 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 BIRC7Q96CA5 298 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 RPL10LQ96L21 214 aaKnown RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 RPRD1AQ96P16 312 aaPredicted RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 SLC2A13Q96QE2 648 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 ACE2Q9BYF1 805 aaPredicted RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 SIK2Q9H0K1 926 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 VPS16Q9H269 839 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 KDM4CQ9H3R0 1056 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 C6orf106Q9H6K1 298 aaPredicted RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 TM9SF3Q9HD45 589 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 ASNSD1Q9NWL6 643 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 TAB2Q9NYJ8 693 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 ADAMTS1Q9UHI8 967 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 INTS6Q9UL03 887 aaKnown RBP12.81□□□□□ -0.36
SGCA-202ENST00000344627 FHOD1Q9Y613 1164 aa12.81□□□□□ -0.36
SGCA-202ENST00000344627 A0A1B0GVT2 93 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 TTC34A8MYJ7 566 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 M0QYT0 321 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 MAGEC1O60732 1142 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 IGLV3-25P01717 112 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 VASPP50552 380 aaPredicted RBP12.8□□□□□ -0.36
SGCA-202ENST00000344627 C21orf59P57076 290 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 KIF19Q2TAC6 998 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 PTPN20Q4JDL3 420 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 SLC45A4Q5BKX6 768 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 TCP11X2Q5H9J9 407 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 TTC39BQ5VTQ0 682 aaPredicted RBP12.8□□□□□ -0.36
SGCA-202ENST00000344627 KIAA0895LQ68EN5 471 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 SND1Q7KZF4 910 aaKnown RBP eCLIP12.8□□□□□ -0.36
SGCA-202ENST00000344627 ERICH1Q86X53 443 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 MMAAQ8IVH4 418 aaKnown RBP12.8□□□□□ -0.36
SGCA-202ENST00000344627 APCDD1Q8J025 514 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 CCAR2Q8N163 923 aaKnown RBP12.8□□□□□ -0.36
SGCA-202ENST00000344627 LMLNQ96KR4 655 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 OMDQ99983 421 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 PABPC3Q9H361 631 aaKnown RBP12.8□□□□□ -0.36
SGCA-202ENST00000344627 LMBRD1Q9NUN5 540 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 FBXL12Q9NXK8 326 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 SLCO3A1Q9UIG8 710 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 VANGL2Q9ULK5 521 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 FNDC3AQ9Y2H6 1198 aaKnown RBP12.8□□□□□ -0.36
SGCA-202ENST00000344627 GPSM3Q9Y4H4 160 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 ITIH6Q6UXX5 1313 aa12.8□□□□□ -0.36
SGCA-202ENST00000344627 WDFY3Q8IZQ1 3526 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 EDDM13A0A1B0GTR0 161 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 A0A1W2PPC4 97 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 TAF4O00268 1085 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 DAB1O75553 588 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 ADH1BP00325 375 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 NOS2P35228 1153 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 GGCXP38435 758 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 CTSKP43235 329 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 CSNK1EP49674 416 aaKnown RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 STK19P49842 368 aaPredicted RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 SULT1E1P49888 294 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 CCR5P51681 352 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 BNC1Q01954 994 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 KCNMA1Q12791 1236 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 ZNF177Q13360 481 aaPredicted RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 AUHQ13825 339 aaKnown RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 ACAP1Q15027 740 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 SMAD1Q15797 465 aaKnown RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 ACCSLQ4AC99 568 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 OLFML1Q6UWY5 402 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 SLCO6A1Q86UG4 719 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 TMPRSS12Q86WS5 348 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 PDCD7Q8N8D1 485 aaKnown RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 OR2T34Q8NGX1 318 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 C18orf8Q96DM3 657 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 MRGPRX3Q96LB0 322 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 PCMTD1Q96MG8 357 aaPredicted RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 GBP4Q96PP9 640 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.79□□□□□ -0.36
SGCA-202ENST00000344627 SNX11Q9Y5W9 270 aa12.79□□□□□ -0.36
SGCA-202ENST00000344627 MUC22E2RYF6 1773 aaPredicted RBP12.79□□□□□ -0.36
SGCA-202ENST00000344627 CABIN1Q9Y6J0 2220 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 A0A1B0GTQ1 180 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 A0A1B0GVM2 712 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 A0A1W2PP55 124 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 TCAF2A6NFQ2 919 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms